Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 METTL15P3-201ENST00000415522 1221 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 Z93019.1-201ENST00000416450 973 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AL356806.1-201ENST00000422524 916 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AL445528.1-201ENST00000426330 420 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 NPM1P26-201ENST00000426339 738 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 MTCO1P51-201ENST00000427672 1060 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK3Q00526 BX679664.2-201ENST00000439282 283 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC092106.1-201ENST00000444291 373 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK3Q00526 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC105918.1-201ENST00000474399 838 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 ATP5LP5-201ENST00000483050 299 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 COL6A4P2-205ENST00000509855 506 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 BX510359.5-201ENST00000515651 304 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AC026688.1-201ENST00000520639 1168 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK3Q00526 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CDK3Q00526 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AL121839.1-201ENST00000556233 1185 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK3Q00526 AP001267.4-201ENST00000602598 545 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AC015802.5-201ENST00000607478 399 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AC241377.1-201ENST00000619797 406 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 AL162233.1-201ENST00000620014 944 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK3Q00526 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDK3Q00526 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK3Q00526 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK3Q00526 AC018809.2-201ENST00000602436 3823 ntBASIC5.5□□□□□ -1.53
CDK3Q00526 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK3Q00526 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
CDK3Q00526 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK3Q00526 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK3Q00526 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDK3Q00526 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 RN7SKP59-201ENST00000410520 314 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK3Q00526 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 TXNP2-201ENST00000443918 295 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.49□□□□□ -1.53
CDK3Q00526 RPL31P20-201ENST00000449593 360 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 RNU6-319P-201ENST00000516025 108 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 RN7SKP253-201ENST00000516424 309 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDK3Q00526 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 AC090022.1-201ENST00000546569 311 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK3Q00526 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.49□□□□□ -1.53
CDK3Q00526 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK3Q00526 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 H3F3BP2-201ENST00000583907 357 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK3Q00526 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 SUGT1P3-202ENST00000604259 383 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 OR51C1P-201ENST00000608504 942 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 AC084036.1-201ENST00000609190 508 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 AC005840.5-201ENST00000619166 599 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 AC006213.5-201ENST00000619673 288 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.49□□□□□ -1.53
CDK3Q00526 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK3Q00526 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK3Q00526 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CDK3Q00526 AC012078.1-201ENST00000405035 1646 ntBASIC5.48□□□□□ -1.53
CDK3Q00526 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK3Q00526 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.48□□□□□ -1.53
CDK3Q00526 AC068870.1-201ENST00000563737 2455 ntBASIC5.48□□□□□ -1.53
CDK3Q00526 HSPD1P7-201ENST00000447985 1686 ntBASIC5.48□□□□□ -1.53
CDK3Q00526 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK3Q00526 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDK3Q00526 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.48□□□□□ -1.53
CDK3Q00526 RNU6-883P-201ENST00000384597 107 ntBASIC5.48□□□□□ -1.53
CDK3Q00526 AC005522.1-201ENST00000395416 346 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms