Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNA5SP132-201ENST00000364725 118 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3AP84243 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 PRUNEP1-201ENST00000425846 705 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AL121776.1-201ENST00000429337 372 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AL136231.1-201ENST00000429407 730 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC023271.1-201ENST00000445936 1090 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC105399.1-202ENST00000447303 205 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 GAPDHP14-201ENST00000450472 937 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 HMGB1P44-201ENST00000508597 572 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3AP84243 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3AP84243 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3AP84243 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3AP84243 OR11H3P-201ENST00000554547 982 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3AP84243 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.88□□□□□ -1.63
H3F3AP84243 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC000068.2-201ENST00000608816 460 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC004477.3-201ENST00000614061 590 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC135068.5-201ENST00000624197 983 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC021766.1-201ENST00000624404 741 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H3F3AP84243 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 CASC19-248ENST00000641674 1356 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 HSPA8P14-201ENST00000552265 1805 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 AC100757.1-201ENST00000616872 1835 ntBASIC4.88□□□□□ -1.63
H3F3AP84243 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.88□□□□□ -1.63
H3F3AP84243 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
H3F3AP84243 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
H3F3AP84243 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 DBIP1-201ENST00000401435 260 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AL358178.1-201ENST00000407698 397 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3AP84243 SRSF1P1-201ENST00000424058 520 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.87□□□□□ -1.63
H3F3AP84243 NAP1L4P2-201ENST00000425958 899 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AL391987.1-201ENST00000441025 200 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.87□□□□□ -1.63
H3F3AP84243 RPS4XP12-201ENST00000461747 709 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AL136038.1-201ENST00000497246 351 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3AP84243 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3AP84243 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 MTND6P2-201ENST00000512226 524 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 SCARNA20.4-201ENST00000516969 131 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 FTH1P11-201ENST00000517577 551 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3AP84243 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3AP84243 AL359219.2-201ENST00000555184 348 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AP005403.1-201ENST00000579720 229 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 MIR7853-201ENST00000584820 132 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 AC011445.2-201ENST00000599274 173 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AL356608.1-201ENST00000610034 820 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 MIR6133-201ENST00000617057 108 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.87□□□□□ -1.63
H3F3AP84243 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 MIR8080-201ENST00000622224 89 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3AP84243 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3AP84243 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 MAPK10-328ENST00000641553 4009 ntBASIC4.87□□□□□ -1.63
H3F3AP84243 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.87□□□□□ -1.63
H3F3AP84243 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms