Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 AC091953.5-201ENST00000622919 233 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AC087821.1-201ENST00000623639 567 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AL731566.1-201ENST00000620490 1937 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PRKDCP78527 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PRKDCP78527 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
PRKDCP78527 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRKDCP78527 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PRKDCP78527 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.65□□□□□ -1.82
PRKDCP78527 SNORA77-201ENST00000408716 125 ntBASIC3.65□□□□□ -1.82
PRKDCP78527 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.82
PRKDCP78527 VN1R34P-201ENST00000447387 883 ntBASIC3.65□□□□□ -1.82
PRKDCP78527 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.82
PRKDCP78527 RN7SL176P-201ENST00000580352 264 ntBASIC3.65□□□□□ -1.82
PRKDCP78527 AC011477.5-201ENST00000586571 259 ntBASIC3.65□□□□□ -1.82
PRKDCP78527 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.82
PRKDCP78527 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.65□□□□□ -1.82
PRKDCP78527 ARF4P1-201ENST00000605447 541 ntBASIC3.65□□□□□ -1.82
PRKDCP78527 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC3.65□□□□□ -1.82
PRKDCP78527 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.82
PRKDCP78527 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRKDCP78527 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.65□□□□□ -1.82
PRKDCP78527 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRKDCP78527 TCP11X1-202ENST00000622971 1372 ntBASIC3.65□□□□□ -1.82
PRKDCP78527 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRKDCP78527 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PRKDCP78527 SNORA73.1-201ENST00000363107 205 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 GTF2IP5-201ENST00000414608 731 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 AL358176.3-201ENST00000420757 454 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKDCP78527 AC108751.3-201ENST00000461814 1020 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 AC093827.1-201ENST00000480094 861 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKDCP78527 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.65□□□□□ -1.83
PRKDCP78527 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC3.65□□□□□ -1.83
PRKDCP78527 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 OR51B3P-201ENST00000412287 913 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 RPL23AP56-201ENST00000460778 453 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 AC007016.1-201ENST00000512110 244 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 MTCO1P49-201ENST00000523429 802 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 OR8R1P-201ENST00000543943 764 ntBASIC3.65□□□□□ -1.83
PRKDCP78527 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKDCP78527 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKDCP78527 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKDCP78527 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
PRKDCP78527 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC3.64□□□□□ -1.83
PRKDCP78527 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC3.64□□□□□ -1.83
PRKDCP78527 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PRKDCP78527 RNA5SP397-201ENST00000391323 118 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AL021331.1-201ENST00000402817 582 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AC093578.1-201ENST00000415219 368 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AL451136.1-201ENST00000435399 325 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 RPS3AP54-201ENST00000435535 734 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AC008481.1-201ENST00000463278 396 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AC091959.2-201ENST00000477363 321 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AC244100.1-202ENST00000621554 382 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PRKDCP78527 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.64□□□□□ -1.83
PRKDCP78527 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PRKDCP78527 AL031651.1-201ENST00000615357 1438 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKDCP78527 AC107980.1-201ENST00000558671 3355 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKDCP78527 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC3.64□□□□□ -1.83
PRKDCP78527 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PRKDCP78527 RN7SL443P-201ENST00000464331 290 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 ATP5LP5-201ENST00000483050 299 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKDCP78527 AC106782.4-201ENST00000568264 210 ntBASIC3.64□□□□□ -1.83
PRKDCP78527 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKDCP78527 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC3.64□□□□□ -1.83
PRKDCP78527 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKDCP78527 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms