Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN18P56856 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 H3F3BP2-201ENST00000583907 357 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN18P56856 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 IMMP1LP3-201ENST00000604197 224 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 AC093388.1-201ENST00000609166 430 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 AC005840.5-201ENST00000619166 599 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 HSPA8P14-201ENST00000552265 1805 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN18P56856 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 OR4F13P-202ENST00000560066 2054 ntBASIC4.96□□□□□ -1.61
CLDN18P56856 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN18P56856 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
CLDN18P56856 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.96□□□□□ -1.61
CLDN18P56856 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CLDN18P56856 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 RNU1-146P-201ENST00000364015 165 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC005522.1-201ENST00000395416 346 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AC009804.1-201ENST00000400949 179 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 SNORA79B-201ENST00000410557 148 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 GTF3AP1-201ENST00000416942 1004 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 MARK2P12-201ENST00000420129 585 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 OR10T1P-201ENST00000424327 947 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 AL590399.2-201ENST00000427536 309 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 CYCSP12-201ENST00000437729 300 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 RN7SL177P-201ENST00000476596 299 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 RPS17P5-201ENST00000498293 408 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 GAPDHP62-201ENST00000515313 990 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 RN7SKP99-201ENST00000517028 307 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 FTH1P11-201ENST00000517577 551 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN18P56856 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC078878.1-201ENST00000539832 958 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN18P56856 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC019322.1-201ENST00000571869 389 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC000068.2-201ENST00000608816 460 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 AL603750.1-201ENST00000624216 1717 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CLDN18P56856 RARSP1-201ENST00000542842 1418 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CLDN18P56856 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 CR383656.5-201ENST00000547616 1340 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 AC092451.3-201ENST00000625067 1343 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLDN18P56856 AC245100.2-201ENST00000454544 1679 ntBASIC4.96□□□□□ -1.62
CLDN18P56856 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN18P56856 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN18P56856 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.95□□□□□ -1.62
CLDN18P56856 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN18P56856 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN18P56856 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN18P56856 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN18P56856 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLDN18P56856 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLDN18P56856 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN18P56856 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLDN18P56856 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms