Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AL450023.1-201ENST00000450868 751 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 AL445665.1-202ENST00000452436 324 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 HLA-DPA3-207ENST00000454398 229 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PKNOX1P55347 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AC135999.1-201ENST00000478962 479 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 RN7SL170P-201ENST00000487098 295 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 COX6B1P2-201ENST00000489624 230 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.28□□□□□ -1.56
PKNOX1P55347 ENPP7P11-201ENST00000505915 627 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 AC016559.2-201ENST00000510759 359 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 MRPS21P7-201ENST00000566937 238 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.28□□□□□ -1.56
PKNOX1P55347 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.28□□□□□ -1.56
PKNOX1P55347 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.28□□□□□ -1.56
PKNOX1P55347 AC109583.2-201ENST00000617367 129 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 AP003072.5-201ENST00000623872 773 ntBASIC5.28□□□□□ -1.56
PKNOX1P55347 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PKNOX1P55347 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PKNOX1P55347 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.28□□□□□ -1.56
PKNOX1P55347 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PKNOX1P55347 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PKNOX1P55347 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKNOX1P55347 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 YES1P1-201ENST00000418510 1628 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC079298.1-201ENST00000625026 1619 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKNOX1P55347 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKNOX1P55347 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PKNOX1P55347 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 RN7SKP187-201ENST00000365536 330 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 DBIP1-201ENST00000401435 260 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 CDY8P-201ENST00000428380 1279 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 CDY20P-201ENST00000447528 1279 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 PRPF38AP1-201ENST00000451976 933 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 LDHBP2-201ENST00000456969 1005 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PKNOX1P55347 RPS12P31-201ENST00000491419 398 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AL049874.2-201ENST00000492636 288 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 IMPA1P1-201ENST00000510718 842 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 MTND6P2-201ENST00000512226 524 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC114786.1-201ENST00000512892 1415 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 SNORA43.3-201ENST00000517240 103 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 NRBF2P4-201ENST00000520874 850 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC022360.1-201ENST00000521058 340 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 OR8G3P-201ENST00000533406 921 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 MTCYBP13-201ENST00000578634 1093 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC127024.5-201ENST00000580085 462 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC012616.1-201ENST00000600294 197 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AP000769.2-201ENST00000602344 396 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AL161912.3-201ENST00000605404 628 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC108865.2-201ENST00000606881 432 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.27□□□□□ -1.57
PKNOX1P55347 AC004817.4-201ENST00000602396 3625 ntBASIC5.27□□□□□ -1.57
PKNOX1P55347 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.26□□□□□ -1.57
PKNOX1P55347 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PKNOX1P55347 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PKNOX1P55347 EI24P3-201ENST00000399046 1062 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AL445213.1-201ENST00000412589 747 ntBASIC5.26□□□□□ -1.57
PKNOX1P55347 AC211486.3-201ENST00000412694 621 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms