Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 AP001029.2-203ENST00000589795 4910 ntBASIC6.19□□□□□ -1.42
COPB1P53618 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COPB1P53618 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 CASC19-238ENST00000641523 1558 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 PWAR1-201ENST00000624188 2414 ntBASIC6.18□□□□□ -1.42
COPB1P53618 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 AC104966.1-201ENST00000467010 1464 ntBASIC6.18□□□□□ -1.42
COPB1P53618 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 RNU4-39P-201ENST00000362455 127 ntBASIC6.18□□□□□ -1.42
COPB1P53618 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COPB1P53618 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 CCNB2P1-201ENST00000399411 1150 ntBASIC6.18□□□□□ -1.42
COPB1P53618 PTGES3P2-201ENST00000407942 482 ntBASIC6.18□□□□□ -1.42
COPB1P53618 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.18□□□□□ -1.42
COPB1P53618 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 AC126120.1-201ENST00000431082 470 ntBASIC6.18□□□□□ -1.42
COPB1P53618 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 RPSAP37-201ENST00000470913 821 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AC009120.1-201ENST00000493458 473 ntBASIC6.18□□□□□ -1.42
COPB1P53618 RBBP4P1-201ENST00000502424 1276 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.18□□□□□ -1.42
COPB1P53618 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 HMGN2P36-201ENST00000529541 409 ntBASIC6.18□□□□□ -1.42
COPB1P53618 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.18□□□□□ -1.42
COPB1P53618 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 SETP3-201ENST00000581726 813 ntBASIC6.18□□□□□ -1.42
COPB1P53618 MIR4260-201ENST00000583107 67 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 ABI1P1-201ENST00000603375 1120 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 AP001437.1-201ENST00000608783 456 ntBASIC6.18□□□□□ -1.42
COPB1P53618 AC096586.2-201ENST00000610260 441 ntBASIC6.18□□□□□ -1.42
COPB1P53618 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COPB1P53618 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 AC006927.4-201ENST00000639187 543 ntBASIC6.18□□□□□ -1.42
COPB1P53618 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COPB1P53618 AC008691.1-209ENST00000642094 814 ntBASIC6.18□□□□□ -1.42
COPB1P53618 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
COPB1P53618 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COPB1P53618 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
COPB1P53618 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COPB1P53618 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 ABCC13-202ENST00000463099 3842 ntBASIC6.17□□□□□ -1.42
COPB1P53618 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 AC006600.2-201ENST00000624834 2506 ntBASIC6.17□□□□□ -1.42
COPB1P53618 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPB1P53618 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COPB1P53618 RNU6-618P-201ENST00000363518 112 ntBASIC6.17□□□□□ -1.42
COPB1P53618 GCNT6-201ENST00000379591 934 ntBASIC6.17□□□□□ -1.42
COPB1P53618 SNORA5.1-201ENST00000384275 131 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AL035405.1-201ENST00000400795 710 ntBASIC6.17□□□□□ -1.42
COPB1P53618 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.17□□□□□ -1.42
COPB1P53618 GPS2P1-201ENST00000411761 986 ntBASIC6.17□□□□□ -1.42
COPB1P53618 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.17□□□□□ -1.42
COPB1P53618 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.17□□□□□ -1.42
COPB1P53618 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.17□□□□□ -1.42
COPB1P53618 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.17□□□□□ -1.42
COPB1P53618 NXT1P1-201ENST00000458481 316 ntBASIC6.17□□□□□ -1.42
COPB1P53618 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.17□□□□□ -1.42
COPB1P53618 AC108729.1-201ENST00000487812 947 ntBASIC6.17□□□□□ -1.42
COPB1P53618 AC093763.2-201ENST00000505334 1223 ntBASIC6.17□□□□□ -1.42
COPB1P53618 DUTP7-201ENST00000507982 486 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms