Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CASP4P49662 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.85□□□□□ -1.47
CASP4P49662 AP000619.2-201ENST00000546014 969 ntBASIC5.85□□□□□ -1.47
CASP4P49662 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.85□□□□□ -1.47
CASP4P49662 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.85□□□□□ -1.47
CASP4P49662 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.85□□□□□ -1.47
CASP4P49662 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.85□□□□□ -1.47
CASP4P49662 AC011445.2-201ENST00000599274 173 ntBASIC5.85□□□□□ -1.47
CASP4P49662 LSM1P2-201ENST00000604911 322 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AL356608.1-201ENST00000610034 820 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AC079395.2-201ENST00000610982 737 ntBASIC5.85□□□□□ -1.47
CASP4P49662 MIR6862-1-201ENST00000613016 70 ntBASIC5.85□□□□□ -1.47
CASP4P49662 MIR6862-2-201ENST00000614755 70 ntBASIC5.85□□□□□ -1.47
CASP4P49662 MIR6729-201ENST00000618194 65 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.85□□□□□ -1.47
CASP4P49662 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.85□□□□□ -1.47
CASP4P49662 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CASP4P49662 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.84□□□□□ -1.47
CASP4P49662 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CASP4P49662 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CASP4P49662 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CASP4P49662 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CASP4P49662 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.84□□□□□ -1.47
CASP4P49662 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CASP4P49662 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CASP4P49662 RN7SKP206-201ENST00000410823 293 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AL390774.1-201ENST00000411924 246 ntBASIC5.84□□□□□ -1.47
CASP4P49662 DPPA2P2-201ENST00000418220 897 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AC117434.1-201ENST00000419971 836 ntBASIC5.84□□□□□ -1.47
CASP4P49662 DSTNP5-201ENST00000427921 523 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AL121776.1-201ENST00000429337 372 ntBASIC5.84□□□□□ -1.47
CASP4P49662 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.84□□□□□ -1.47
CASP4P49662 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CASP4P49662 PPIAP20-201ENST00000449839 135 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AC104634.1-201ENST00000452720 462 ntBASIC5.84□□□□□ -1.47
CASP4P49662 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.84□□□□□ -1.47
CASP4P49662 AC007386.1-201ENST00000455212 582 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AC114982.2-201ENST00000461396 358 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AC106872.4-201ENST00000510050 523 ntBASIC5.84□□□□□ -1.47
CASP4P49662 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.84□□□□□ -1.47
CASP4P49662 RNA5SP373-201ENST00000517271 95 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.84□□□□□ -1.47
CASP4P49662 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.84□□□□□ -1.47
CASP4P49662 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.84□□□□□ -1.47
CASP4P49662 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.84□□□□□ -1.47
CASP4P49662 AC060766.1-201ENST00000590824 627 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AC009027.1-201ENST00000604510 479 ntBASIC5.84□□□□□ -1.47
CASP4P49662 AC136428.4-201ENST00000634254 1155 ntBASIC5.84□□□□□ -1.47
CASP4P49662 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CASP4P49662 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.84□□□□□ -1.47
CASP4P49662 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CASP4P49662 AP001284.1-201ENST00000528393 2118 ntBASIC5.84□□□□□ -1.47
CASP4P49662 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CASP4P49662 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
CASP4P49662 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
CASP4P49662 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.83□□□□□ -1.48
CASP4P49662 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 RNA5SP435-201ENST00000364044 108 ntBASIC5.83□□□□□ -1.48
CASP4P49662 RNA5SP241-201ENST00000391326 114 ntBASIC5.83□□□□□ -1.48
CASP4P49662 NACAP7-201ENST00000407371 609 ntBASIC5.83□□□□□ -1.48
CASP4P49662 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.83□□□□□ -1.48
CASP4P49662 RN7SKP59-201ENST00000410520 314 ntBASIC5.83□□□□□ -1.48
CASP4P49662 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.83□□□□□ -1.48
CASP4P49662 AC079355.1-201ENST00000421770 223 ntBASIC5.83□□□□□ -1.48
CASP4P49662 RPL7AP49-201ENST00000429522 581 ntBASIC5.83□□□□□ -1.48
CASP4P49662 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.83□□□□□ -1.48
CASP4P49662 AL591438.1-201ENST00000433508 581 ntBASIC5.83□□□□□ -1.48
CASP4P49662 GAPDHP25-201ENST00000447061 1001 ntBASIC5.83□□□□□ -1.48
CASP4P49662 NOP56P2-201ENST00000447491 769 ntBASIC5.83□□□□□ -1.48
CASP4P49662 RPL7P45-201ENST00000455851 743 ntBASIC5.83□□□□□ -1.48
CASP4P49662 EIF3LP3-201ENST00000495197 822 ntBASIC5.83□□□□□ -1.48
CASP4P49662 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.83□□□□□ -1.48
CASP4P49662 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.83□□□□□ -1.48
CASP4P49662 AC126177.5-201ENST00000549599 178 ntBASIC5.83□□□□□ -1.48
CASP4P49662 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.83□□□□□ -1.48
CASP4P49662 RPL10P14-201ENST00000565265 298 ntBASIC5.83□□□□□ -1.48
CASP4P49662 AC005341.1-201ENST00000571086 708 ntBASIC5.83□□□□□ -1.48
CASP4P49662 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.83□□□□□ -1.48
CASP4P49662 RN7SL290P-201ENST00000578661 300 ntBASIC5.83□□□□□ -1.48
CASP4P49662 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.83□□□□□ -1.48
CASP4P49662 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 AL031658.2-201ENST00000616850 651 ntBASIC5.83□□□□□ -1.48
CASP4P49662 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.83□□□□□ -1.48
CASP4P49662 MTCO1P1-201ENST00000624263 1081 ntBASIC5.83□□□□□ -1.48
CASP4P49662 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CASP4P49662 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
CASP4P49662 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms