Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.41□□□□□ -1.54
CXCL12P48061 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.41□□□□□ -1.54
CXCL12P48061 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.41□□□□□ -1.54
CXCL12P48061 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.41□□□□□ -1.54
CXCL12P48061 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 AL360270.2-201ENST00000562952 5985 ntBASIC5.41□□□□□ -1.54
CXCL12P48061 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.41□□□□□ -1.54
CXCL12P48061 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CXCL12P48061 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CXCL12P48061 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CXCL12P48061 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
CXCL12P48061 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.4□□□□□ -1.54
CXCL12P48061 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CXCL12P48061 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CXCL12P48061 SNX18P3-202ENST00000565670 1750 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CXCL12P48061 SNURFL-201ENST00000309296 343 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 AL078599.1-201ENST00000402075 293 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.4□□□□□ -1.54
CXCL12P48061 GJA6P-201ENST00000415117 1042 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 COX6B1P1-201ENST00000415962 213 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.4□□□□□ -1.54
CXCL12P48061 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.4□□□□□ -1.54
CXCL12P48061 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.4□□□□□ -1.54
CXCL12P48061 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.4□□□□□ -1.54
CXCL12P48061 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.4□□□□□ -1.54
CXCL12P48061 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.4□□□□□ -1.54
CXCL12P48061 RSU1P1-201ENST00000453416 441 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 RPL17P2-201ENST00000491913 451 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 snoU109.5-201ENST00000516231 132 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 RNA5SP373-201ENST00000517271 95 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 RAB9BP1-201ENST00000519581 626 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 AC134349.2-201ENST00000535136 910 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 YWHABP2-201ENST00000540201 713 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CXCL12P48061 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.4□□□□□ -1.54
CXCL12P48061 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.4□□□□□ -1.54
CXCL12P48061 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.4□□□□□ -1.54
CXCL12P48061 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.4□□□□□ -1.54
CXCL12P48061 AP001885.1-201ENST00000621658 558 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.4□□□□□ -1.54
CXCL12P48061 MIR7641-1-201ENST00000627518 61 ntBASIC5.4□□□□□ -1.54
CXCL12P48061 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.4□□□□□ -1.54
CXCL12P48061 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CXCL12P48061 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CXCL12P48061 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CXCL12P48061 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CXCL12P48061 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CXCL12P48061 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CXCL12P48061 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CXCL12P48061 AP004289.1-201ENST00000436307 2205 ntBASIC5.4□□□□□ -1.55
CXCL12P48061 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CXCL12P48061 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.4□□□□□ -1.55
CXCL12P48061 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.4□□□□□ -1.55
CXCL12P48061 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.4□□□□□ -1.55
CXCL12P48061 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CXCL12P48061 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CXCL12P48061 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CXCL12P48061 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 NLRP3P1-201ENST00000622303 1785 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 AP000547.3-204ENST00000588548 2523 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 AC006600.2-201ENST00000624834 2506 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
CXCL12P48061 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CXCL12P48061 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.39□□□□□ -1.55
CXCL12P48061 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.39□□□□□ -1.55
CXCL12P48061 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 AC097484.1-201ENST00000471148 389 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 PDCL3P4-201ENST00000489621 720 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 RN7SL591P-201ENST00000496150 292 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.39□□□□□ -1.55
CXCL12P48061 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.39□□□□□ -1.55
CXCL12P48061 AP002373.2-201ENST00000541631 1060 ntBASIC5.39□□□□□ -1.55
CXCL12P48061 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.39□□□□□ -1.55
CXCL12P48061 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.39□□□□□ -1.55
CXCL12P48061 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.39□□□□□ -1.55
CXCL12P48061 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CXCL12P48061 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CXCL12P48061 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CXCL12P48061 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CXCL12P48061 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms