Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SNORA70.20-201ENST00000516848 126 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.2□□□□□ -1.58
APOBEC1P41238 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
APOBEC1P41238 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.2□□□□□ -1.58
APOBEC1P41238 NOP56P3-201ENST00000549457 385 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC079600.1-201ENST00000550326 297 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.2□□□□□ -1.58
APOBEC1P41238 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 AL391001.1-201ENST00000602747 715 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC245389.2-201ENST00000616023 576 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC242843.1-201ENST00000618702 573 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AL359742.1-201ENST00000622497 540 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC105105.5-201ENST00000622635 1294 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 AC022919.1-201ENST00000624979 626 ntBASIC5.2□□□□□ -1.58
APOBEC1P41238 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
APOBEC1P41238 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
APOBEC1P41238 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.2□□□□□ -1.58
APOBEC1P41238 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.2□□□□□ -1.58
APOBEC1P41238 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOBEC1P41238 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
APOBEC1P41238 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
APOBEC1P41238 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 AC232271.1-201ENST00000602455 2715 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.19□□□□□ -1.58
APOBEC1P41238 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 MIR375-201ENST00000362103 64 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 RNU1-136P-201ENST00000384181 164 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
APOBEC1P41238 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.19□□□□□ -1.58
APOBEC1P41238 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 AC245060.4-201ENST00000413293 1121 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 PTP4A1P3-201ENST00000433661 420 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 HMGN1P2-201ENST00000445197 310 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 RPL5P10-201ENST00000445207 894 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 HLA-DPA3-207ENST00000454398 229 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 MTND2P6-201ENST00000455337 1030 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 AC022215.1-201ENST00000481770 362 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 RPS7P6-201ENST00000485777 579 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AP003102.1-201ENST00000525638 661 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 NANOGNBP2-201ENST00000544753 553 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 AC083837.1-201ENST00000565297 2994 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.19□□□□□ -1.58
APOBEC1P41238 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 BNIP3P39-201ENST00000601077 554 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 MTCO3P22-201ENST00000603219 784 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 MTATP6P2-201ENST00000603319 678 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 AL035661.1-201ENST00000620459 1144 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 AC130360.2-201ENST00000533477 1556 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
APOBEC1P41238 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
APOBEC1P41238 NLRP3P1-201ENST00000622303 1785 ntBASIC5.19□□□□□ -1.58
APOBEC1P41238 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
APOBEC1P41238 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
APOBEC1P41238 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms