Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HMGCLP35914 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCLP35914 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCLP35914 AC093849.1-201ENST00000563631 2209 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 AC100757.1-201ENST00000616872 1835 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCLP35914 RNA5SP132-201ENST00000364725 118 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 SNORA5.1-201ENST00000384275 131 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 RN7SKP206-201ENST00000410823 293 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 AL513325.1-201ENST00000417716 1034 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCLP35914 SRSF1P1-201ENST00000424058 520 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCLP35914 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGCLP35914 PRUNEP1-201ENST00000425846 705 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 AL391987.1-201ENST00000441025 200 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 RN7SL174P-201ENST00000475578 289 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 MORF4L2P1-201ENST00000503761 858 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 AC109464.1-201ENST00000511091 819 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 SCARNA16.4-201ENST00000516956 187 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 SEPT10P1-201ENST00000517342 1162 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCLP35914 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCLP35914 OR11H3P-201ENST00000554547 982 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HMGCLP35914 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCLP35914 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCLP35914 MIR7853-201ENST00000584820 132 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCLP35914 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 AC000068.2-201ENST00000608816 460 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 AC007786.3-201ENST00000615154 596 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 AC135068.5-201ENST00000624197 983 ntBASIC5.44□□□□□ -1.54
HMGCLP35914 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCLP35914 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCLP35914 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HMGCLP35914 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCLP35914 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCLP35914 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCLP35914 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HMGCLP35914 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMGCLP35914 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCLP35914 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMGCLP35914 DBIP1-201ENST00000401435 260 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 PPIAP9-201ENST00000403866 498 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 RPL5P25-201ENST00000441148 775 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 AL035090.1-201ENST00000454835 332 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HMGCLP35914 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCLP35914 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 SCARNA20.4-201ENST00000516969 131 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGCLP35914 BLZF2P-201ENST00000553776 1130 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCLP35914 OR51C1P-201ENST00000608504 942 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 WBP1LP8-201ENST00000617401 327 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 MIR4302-201ENST00000638058 60 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 HSPA8P14-201ENST00000552265 1805 ntBASIC5.43□□□□□ -1.54
HMGCLP35914 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMGCLP35914 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HMGCLP35914 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCLP35914 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HMGCLP35914 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCLP35914 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCLP35914 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCLP35914 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCLP35914 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCLP35914 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HMGCLP35914 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCLP35914 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCLP35914 SNORA16A-201ENST00000384342 137 ntBASIC5.42□□□□□ -1.54
HMGCLP35914 OR3A2-201ENST00000408891 1076 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms