Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.69□□□□□ -1.34
TM4SF1P30408 HSPD1P7-201ENST00000447985 1686 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.69□□□□□ -1.34
TM4SF1P30408 U3.3-201ENST00000362986 216 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 AL353625.1-202ENST00000366273 571 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 MIR600-201ENST00000385007 98 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 AC240504.1-201ENST00000395709 845 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 RPS4XP16-201ENST00000427198 791 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 BX119904.3-201ENST00000428194 957 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.69□□□□□ -1.34
TM4SF1P30408 RPL7P40-201ENST00000481703 745 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.69□□□□□ -1.34
TM4SF1P30408 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.69□□□□□ -1.34
TM4SF1P30408 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.69□□□□□ -1.34
TM4SF1P30408 GTF2F2P1-201ENST00000511083 675 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 OR7H2P-201ENST00000513483 306 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 GTF2IP11-201ENST00000526931 420 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 TRAV11-201ENST00000539512 339 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 AC209154.1-201ENST00000582156 337 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 AL627230.1-201ENST00000613077 211 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 AL591926.8-201ENST00000616876 211 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.69□□□□□ -1.34
TM4SF1P30408 AL353796.1-201ENST00000561542 3241 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TM4SF1P30408 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.69□□□□□ -1.34
TM4SF1P30408 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TM4SF1P30408 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 AL132656.3-201ENST00000606384 1595 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 BRD7P6-201ENST00000431406 1860 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
TM4SF1P30408 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TM4SF1P30408 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.68□□□□□ -1.34
TM4SF1P30408 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TM4SF1P30408 AC126755.2-208ENST00000327792 462 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 AC138969.1-213ENST00000331436 462 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.68□□□□□ -1.34
TM4SF1P30408 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.68□□□□□ -1.34
TM4SF1P30408 AL590399.4-201ENST00000436561 601 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 RHOT1P3-201ENST00000436571 331 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.68□□□□□ -1.34
TM4SF1P30408 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 PDCL3P4-201ENST00000489621 720 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 AC113398.2-201ENST00000507630 558 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.68□□□□□ -1.34
TM4SF1P30408 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.68□□□□□ -1.34
TM4SF1P30408 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.68□□□□□ -1.34
TM4SF1P30408 MIR4691-201ENST00000583764 85 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.68□□□□□ -1.34
TM4SF1P30408 AP000769.2-201ENST00000602344 396 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TM4SF1P30408 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.68□□□□□ -1.34
TM4SF1P30408 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TM4SF1P30408 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.68□□□□□ -1.34
TM4SF1P30408 AC144833.1-201ENST00000567953 4089 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 OR4F13P-202ENST00000560066 2054 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
TM4SF1P30408 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 MTCO1P8-201ENST00000416914 1523 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 AC132825.1-201ENST00000463573 2247 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 DBIP1-201ENST00000401435 260 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.67□□□□□ -1.34
TM4SF1P30408 MIR1182-201ENST00000408363 97 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TM4SF1P30408 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.67□□□□□ -1.34
TM4SF1P30408 RIMKLBP2-201ENST00000424737 654 ntBASIC6.67□□□□□ -1.34
TM4SF1P30408 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.67□□□□□ -1.34
TM4SF1P30408 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.67□□□□□ -1.34
TM4SF1P30408 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms