Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.24□□□□□ -1.41
COL4A5P29400 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.24□□□□□ -1.41
COL4A5P29400 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.24□□□□□ -1.41
COL4A5P29400 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A5P29400 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 AC068287.1-201ENST00000430283 295 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 RPL12P20-201ENST00000475538 479 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 RNA5SP392-201ENST00000516905 112 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A5P29400 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.23□□□□□ -1.41
COL4A5P29400 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL4A5P29400 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 RPL23AP17-201ENST00000401064 499 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A5P29400 RPS29P10-201ENST00000439197 166 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 RPL7P40-201ENST00000481703 745 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A5P29400 AC006427.1-201ENST00000514359 712 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 GTF2IP11-201ENST00000526931 420 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.23□□□□□ -1.41
COL4A5P29400 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A5P29400 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.23□□□□□ -1.41
COL4A5P29400 AC108738.1-201ENST00000603703 237 ntBASIC6.23□□□□□ -1.41
COL4A5P29400 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A5P29400 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A5P29400 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL4A5P29400 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
COL4A5P29400 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
COL4A5P29400 SNORA66-201ENST00000384792 133 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 RPL11P3-201ENST00000395256 523 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 AL049693.1-201ENST00000402760 611 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL4A5P29400 LINC02210-201ENST00000444561 288 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 IGHV5-78-201ENST00000450948 295 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 RPL7AP28-201ENST00000464513 571 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 AC134698.5-201ENST00000519444 336 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A5P29400 AL512782.1-201ENST00000603093 364 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 AC099654.6-201ENST00000636487 512 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A5P29400 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 SAMMSON-226ENST00000642089 1582 ntBASIC6.22□□□□□ -1.41
COL4A5P29400 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A5P29400 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL4A5P29400 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A5P29400 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A5P29400 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
COL4A5P29400 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A5P29400 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
COL4A5P29400 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL4A5P29400 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A5P29400 RPS27AP7-201ENST00000422792 455 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A5P29400 AL137845.2-201ENST00000444292 988 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A5P29400 AC006967.1-201ENST00000467608 589 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 AC010350.1-201ENST00000504908 231 ntBASIC6.21□□□□□ -1.42
COL4A5P29400 AC111000.3-201ENST00000508057 576 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms