Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 USP9YP26-201ENST00000421008 661 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 RPL7P53-201ENST00000421245 739 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC011233.1-201ENST00000422812 283 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 OR5AW1P-201ENST00000426334 1006 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.63□□□□□ -1.19
ERCC3P19447 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC011742.2-201ENST00000443818 352 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 RN7SL382P-201ENST00000482631 282 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC106800.2-201ENST00000514009 1103 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AC023632.1-201ENST00000518463 375 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC7.63□□□□□ -1.19
ERCC3P19447 PDCL2P2-201ENST00000533651 189 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.63□□□□□ -1.19
ERCC3P19447 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC7.63□□□□□ -1.19
ERCC3P19447 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AC016839.1-201ENST00000578162 867 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AC079315.1-201ENST00000602952 623 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 SMIM12P1-201ENST00000603004 274 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AL021707.7-201ENST00000607991 416 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AC099676.1-201ENST00000608886 657 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AL135999.3-201ENST00000610501 812 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AC009090.3-201ENST00000616553 565 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AC021106.3-201ENST00000623925 531 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AP001052.1-201ENST00000626421 99 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.63□□□□□ -1.19
ERCC3P19447 AC073488.9-201ENST00000631601 754 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
ERCC3P19447 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AC005034.3-201ENST00000604845 1747 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 AP005139.1-201ENST00000580702 1647 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 AC104837.1-201ENST00000444644 1587 ntBASIC7.63□□□□□ -1.19
ERCC3P19447 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
ERCC3P19447 PSG10P-201ENST00000501199 1500 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC005702.3-201ENST00000585345 1447 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 Z98755.1-201ENST00000407015 1384 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ERCC3P19447 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 MAPK10-261ENST00000641050 3109 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ERCC3P19447 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 MAPK10-287ENST00000641217 3037 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ERCC3P19447 snoZ40.1-201ENST00000364540 72 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 RNU6-98P-201ENST00000384173 107 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 SNORD116-1-201ENST00000384335 95 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC003045.1-201ENST00000398779 713 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 RN7SKP240-201ENST00000410583 375 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 RN7SKP182-201ENST00000410772 298 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AL929472.1-201ENST00000417484 429 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC115283.1-201ENST00000427353 400 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 AL389925.1-201ENST00000432257 728 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 AL133477.1-201ENST00000457472 514 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.62□□□□□ -1.19
ERCC3P19447 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC084337.1-201ENST00000524809 686 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC124293.1-201ENST00000530034 493 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 YWHABP2-201ENST00000540201 713 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.62□□□□□ -1.19
ERCC3P19447 MIR4502-201ENST00000580432 81 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms