Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU6-883P-201ENST00000384597 107 ntBASIC5.48□□□□□ -1.53
CDH1P12830 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH1P12830 OR1F12-201ENST00000402365 945 ntBASIC5.48□□□□□ -1.53
CDH1P12830 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH1P12830 RPS6P23-201ENST00000413224 722 ntBASIC5.48□□□□□ -1.53
CDH1P12830 HSFY1P1-201ENST00000423928 1178 ntBASIC5.48□□□□□ -1.53
CDH1P12830 OR10T1P-201ENST00000424327 947 ntBASIC5.48□□□□□ -1.53
CDH1P12830 MTCO1P57-201ENST00000432182 261 ntBASIC5.48□□□□□ -1.53
CDH1P12830 GAPDHP14-201ENST00000450472 937 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH1P12830 AC084754.1-201ENST00000463466 464 ntBASIC5.48□□□□□ -1.53
CDH1P12830 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH1P12830 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH1P12830 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH1P12830 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH1P12830 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH1P12830 HMGB1P42-201ENST00000532126 553 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AP004609.2-201ENST00000532177 190 ntBASIC5.48□□□□□ -1.53
CDH1P12830 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH1P12830 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH1P12830 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH1P12830 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH1P12830 HSPE1P2-201ENST00000554777 306 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AL359219.2-201ENST00000555184 348 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AGGF1P7-201ENST00000562369 913 ntBASIC5.48□□□□□ -1.53
CDH1P12830 DPPA2P4-201ENST00000563717 878 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH1P12830 AC063977.5-201ENST00000601044 974 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AC006363.1-201ENST00000603806 463 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AL713998.2-201ENST00000604538 1198 ntBASIC5.48□□□□□ -1.53
CDH1P12830 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH1P12830 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.48□□□□□ -1.53
CDH1P12830 AC241377.1-201ENST00000619797 406 ntBASIC5.48□□□□□ -1.53
CDH1P12830 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH1P12830 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CDH1P12830 MRE11P1-201ENST00000464884 2127 ntBASIC5.48□□□□□ -1.53
CDH1P12830 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH1P12830 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH1P12830 AC005005.4-201ENST00000623789 16698 ntBASIC5.48□□□□□ -1.53
CDH1P12830 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CDH1P12830 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CDH1P12830 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH1P12830 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 RNA5SP394-201ENST00000364216 119 ntBASIC5.47□□□□□ -1.53
CDH1P12830 RNA5SP30-201ENST00000365552 115 ntBASIC5.47□□□□□ -1.53
CDH1P12830 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH1P12830 RMRPP5-201ENST00000411156 267 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AC096921.1-201ENST00000411661 375 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AL136231.1-201ENST00000429407 730 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH1P12830 PCNPP2-201ENST00000441651 455 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH1P12830 AL445665.1-202ENST00000452436 324 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH1P12830 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH1P12830 SNORA26.10-201ENST00000516427 141 ntBASIC5.47□□□□□ -1.53
CDH1P12830 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH1P12830 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH1P12830 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CDH1P12830 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 DHFRP1-201ENST00000579682 559 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AP001496.3-201ENST00000580230 913 ntBASIC5.47□□□□□ -1.53
CDH1P12830 NPM1P45-201ENST00000583151 559 ntBASIC5.47□□□□□ -1.53
CDH1P12830 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 AL390318.1-201ENST00000624564 687 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH1P12830 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 AC012078.1-201ENST00000405035 1646 ntBASIC5.47□□□□□ -1.53
CDH1P12830 AC002525.1-201ENST00000624392 1622 ntBASIC5.47□□□□□ -1.53
CDH1P12830 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH1P12830 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH1P12830 PWAR1-201ENST00000624188 2414 ntBASIC5.47□□□□□ -1.53
CDH1P12830 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CDH1P12830 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH1P12830 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH1P12830 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH1P12830 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH1P12830 AC007938.2-201ENST00000604666 2634 ntBASIC5.46□□□□□ -1.53
CDH1P12830 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.46□□□□□ -1.53
CDH1P12830 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDH1P12830 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
CDH1P12830 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.46□□□□□ -1.53
CDH1P12830 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CDH1P12830 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH1P12830 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CDH1P12830 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH1P12830 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms