Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 RNA5SP394-201ENST00000364216 119 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 RPSAP35-201ENST00000413753 818 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 EEF1B2P8-201ENST00000414101 671 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC007161.1-204ENST00000423039 460 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 GTF3AP5-201ENST00000442645 697 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC073109.1-201ENST00000445066 978 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AL445665.1-202ENST00000452436 324 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC084754.1-201ENST00000463466 464 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 PSMA2P2-201ENST00000504319 686 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC063977.5-201ENST00000601044 974 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AP001962.1-201ENST00000624114 559 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC079298.1-201ENST00000625026 1619 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DPB1P04440 AC004817.4-201ENST00000602396 3625 ntBASIC4.85□□□□□ -1.63
HLA-DPB1P04440 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 SRRM1P3-201ENST00000426911 2678 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC025574.1-201ENST00000554784 1653 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 RNA5SP30-201ENST00000365552 115 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 NENFP1-201ENST00000419476 466 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC117434.1-201ENST00000419971 836 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 BX119321.1-201ENST00000428912 797 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AL022331.1-201ENST00000429025 477 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AL136455.1-201ENST00000441083 1240 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 RPL36AP39-201ENST00000445859 318 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC073909.1-201ENST00000447112 999 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AL450023.1-201ENST00000450868 751 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 RN7SL273P-201ENST00000481561 299 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC109481.1-201ENST00000509173 282 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 RNU6-513P-201ENST00000516104 104 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC022826.1-201ENST00000519383 805 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC022360.1-201ENST00000521058 340 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 HSPE1P2-201ENST00000554777 306 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 DPPA2P4-201ENST00000563717 878 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AP001496.3-201ENST00000580230 913 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 LSM1P2-201ENST00000604911 322 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AC103703.1-201ENST00000634783 663 ntBASIC4.84□□□□□ -1.63
HLA-DPB1P04440 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DPB1P04440 MIR193BHG-214ENST00000641765 509 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms