Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 AL078621.3-201ENST00000623707 2042 ntBASIC5.26□□□□□ -1.57
CLDN9O95484 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CLDN9O95484 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN9O95484 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 MTHFD2P5-201ENST00000320415 844 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN9O95484 RNA5SP510-201ENST00000364697 99 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 AL589994.1-201ENST00000404962 340 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN9O95484 VTI1BP4-201ENST00000427516 527 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 RPS29P14-201ENST00000431518 171 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 RN7SL72P-201ENST00000460697 269 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 AC138866.2-201ENST00000508650 584 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 UGT2A3P7-201ENST00000510485 734 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 SNORA70.11-201ENST00000515987 138 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 SNORA70.13-201ENST00000516116 138 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 SCARNA16.4-201ENST00000516956 187 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 RN7SKP99-201ENST00000517028 307 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN9O95484 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 AC116158.1-201ENST00000560231 2129 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN9O95484 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN9O95484 AC244107.2-201ENST00000611773 76 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 CU639417.4-201ENST00000623928 207 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN9O95484 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 MIPEPP2-201ENST00000422560 1819 ntBASIC5.25□□□□□ -1.57
CLDN9O95484 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN9O95484 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CLDN9O95484 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 SNORA48.4-201ENST00000391089 134 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 OR6E1P-201ENST00000414424 923 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AL596448.1-201ENST00000415024 392 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 Z93019.1-201ENST00000416450 973 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC002504.1-201ENST00000438281 691 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 SUMO2P3-201ENST00000438311 288 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AC019185.1-201ENST00000442718 389 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC092754.1-201ENST00000472975 479 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 PSMA2P2-201ENST00000504319 686 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC090568.1-201ENST00000509499 856 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 SNORD46.2-201ENST00000516021 102 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.24□□□□□ -1.57
CLDN9O95484 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC010547.6-201ENST00000571789 193 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 RN7SL290P-201ENST00000578661 300 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC008521.2-201ENST00000591021 259 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AC027243.2-201ENST00000602530 724 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC109583.2-201ENST00000617367 129 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms