Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CUX2O14529 NXF4-202ENST00000416098 1465 ntBASIC9.25□□□□□ -0.93
CUX2O14529 AC114876.1-201ENST00000490962 1366 ntBASIC9.25□□□□□ -0.93
CUX2O14529 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.25□□□□□ -0.93
CUX2O14529 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
CUX2O14529 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.25□□□□□ -0.93
CUX2O14529 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.25□□□□□ -0.93
CUX2O14529 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CUX2O14529 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.25□□□□□ -0.93
CUX2O14529 AC007346.2-201ENST00000564816 892 ntBASIC9.25□□□□□ -0.93
CUX2O14529 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.25□□□□□ -0.93
CUX2O14529 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
CUX2O14529 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC9.25□□□□□ -0.93
CUX2O14529 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CUX2O14529 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.25□□□□□ -0.93
CUX2O14529 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CUX2O14529 ZNF812P-201ENST00000457674 1694 ntBASIC9.24□□□□□ -0.93
CUX2O14529 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CUX2O14529 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC9.24□□□□□ -0.93
CUX2O14529 LINC02035-201ENST00000610128 5476 ntBASIC9.24□□□□□ -0.93
CUX2O14529 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 AC007161.1-204ENST00000423039 460 ntBASIC9.24□□□□□ -0.93
CUX2O14529 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC9.24□□□□□ -0.93
CUX2O14529 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC9.24□□□□□ -0.93
CUX2O14529 MED28P3-201ENST00000444288 531 ntBASIC9.24□□□□□ -0.93
CUX2O14529 RBMY2TP-201ENST00000451162 947 ntBASIC9.24□□□□□ -0.93
CUX2O14529 CYCSP29-201ENST00000533731 318 ntBASIC9.24□□□□□ -0.93
CUX2O14529 AP000619.2-201ENST00000546014 969 ntBASIC9.24□□□□□ -0.93
CUX2O14529 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.24□□□□□ -0.93
CUX2O14529 MIR4715-201ENST00000584117 79 ntBASIC9.24□□□□□ -0.93
CUX2O14529 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
CUX2O14529 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
CUX2O14529 AC007529.1-201ENST00000418574 2178 ntBASIC9.24□□□□□ -0.93
CUX2O14529 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.93
CUX2O14529 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
CUX2O14529 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CUX2O14529 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CUX2O14529 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CUX2O14529 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CUX2O14529 AL592293.2-201ENST00000422292 996 ntBASIC9.23□□□□□ -0.93
CUX2O14529 AC011005.3-201ENST00000491624 395 ntBASIC9.23□□□□□ -0.93
CUX2O14529 RPL17P2-201ENST00000491913 451 ntBASIC9.23□□□□□ -0.93
CUX2O14529 DSTNP2-201ENST00000504533 515 ntBASIC9.23□□□□□ -0.93
CUX2O14529 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC9.23□□□□□ -0.93
CUX2O14529 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC9.23□□□□□ -0.93
CUX2O14529 AC243756.2-201ENST00000618406 463 ntBASIC9.23□□□□□ -0.93
CUX2O14529 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.23□□□□□ -0.93
CUX2O14529 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CUX2O14529 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CUX2O14529 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
CUX2O14529 AL162456.1-201ENST00000634535 2006 ntBASIC9.23□□□□□ -0.93
CUX2O14529 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.22□□□□□ -0.93
CUX2O14529 RPL23AP83-201ENST00000434984 473 ntBASIC9.22□□□□□ -0.93
CUX2O14529 NIP7P2-201ENST00000485801 544 ntBASIC9.22□□□□□ -0.93
CUX2O14529 RPSAP51-201ENST00000497462 645 ntBASIC9.22□□□□□ -0.93
CUX2O14529 AC140172.1-201ENST00000502928 141 ntBASIC9.22□□□□□ -0.93
CUX2O14529 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC9.22□□□□□ -0.93
CUX2O14529 AC138701.1-201ENST00000524329 714 ntBASIC9.22□□□□□ -0.93
CUX2O14529 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC9.22□□□□□ -0.93
CUX2O14529 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC9.22□□□□□ -0.93
CUX2O14529 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC9.22□□□□□ -0.93
CUX2O14529 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC9.22□□□□□ -0.93
CUX2O14529 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.22□□□□□ -0.93
CUX2O14529 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.22□□□□□ -0.93
CUX2O14529 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CUX2O14529 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
CUX2O14529 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC9.21□□□□□ -0.93
CUX2O14529 RNA5SP455-201ENST00000365190 119 ntBASIC9.21□□□□□ -0.93
CUX2O14529 AL445189.1-201ENST00000405722 338 ntBASIC9.21□□□□□ -0.93
CUX2O14529 GSTM5P1-201ENST00000434751 660 ntBASIC9.21□□□□□ -0.93
CUX2O14529 AL451063.1-201ENST00000450164 1133 ntBASIC9.21□□□□□ -0.93
CUX2O14529 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC9.21□□□□□ -0.93
CUX2O14529 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.21□□□□□ -0.93
CUX2O14529 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.21□□□□□ -0.93
CUX2O14529 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
CUX2O14529 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.93
CUX2O14529 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC9.21□□□□□ -0.93
CUX2O14529 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC9.21□□□□□ -0.93
CUX2O14529 AC068769.1-201ENST00000474767 2426 ntBASIC9.21□□□□□ -0.93
CUX2O14529 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
CUX2O14529 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
CUX2O14529 AP000756.2-201ENST00000624168 2567 ntBASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms