Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC28A1O00337 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SLC28A1O00337 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
SLC28A1O00337 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC28A1O00337 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC28A1O00337 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SLC28A1O00337 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC28A1O00337 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC28A1O00337 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC28A1O00337 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC28A1O00337 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC28A1O00337 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC28A1O00337 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC28A1O00337 RNA5SP131-201ENST00000365452 119 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 RNA5SP241-201ENST00000391326 114 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC245060.4-201ENST00000413293 1121 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 ARAFP1-201ENST00000422172 605 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.3□□□□□ -1.56
SLC28A1O00337 AC113412.1-201ENST00000425840 504 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC127526.2-201ENST00000426436 775 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AL392003.1-201ENST00000434394 243 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC097523.2-201ENST00000435551 652 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AP006222.1-205ENST00000450734 457 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC28A1O00337 RPS23P6-201ENST00000466136 431 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.3□□□□□ -1.56
SLC28A1O00337 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC28A1O00337 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.3□□□□□ -1.56
SLC28A1O00337 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 RNU6-615P-201ENST00000516065 106 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AP002981.1-201ENST00000517692 975 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC28A1O00337 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC28A1O00337 FAM60CP-201ENST00000591086 664 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC010503.3-201ENST00000594355 540 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC28A1O00337 OR51C1P-201ENST00000608504 942 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC28A1O00337 AC025262.3-201ENST00000623666 360 ntBASIC5.3□□□□□ -1.56
SLC28A1O00337 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC28A1O00337 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC28A1O00337 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC28A1O00337 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC28A1O00337 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC28A1O00337 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 OR9K1P-202ENST00000641111 3217 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SLC28A1O00337 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC28A1O00337 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 MRE11P1-201ENST00000464884 2127 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 MIR375-201ENST00000362103 64 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 RNU6-386P-201ENST00000362650 107 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC28A1O00337 RNA5SP187-201ENST00000384400 119 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 SNORA48.4-201ENST00000391089 134 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AL445213.1-201ENST00000412589 747 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC28A1O00337 BX119321.1-201ENST00000428912 797 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 RPL7AP49-201ENST00000429522 581 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AL591438.1-201ENST00000433508 581 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 AL138787.1-202ENST00000437804 898 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 RPL5P25-201ENST00000441148 775 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AC016772.1-201ENST00000444170 1261 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC28A1O00337 MTND6P32-201ENST00000457611 483 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC28A1O00337 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC28A1O00337 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC28A1O00337 RN7SKP34-201ENST00000516142 244 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC28A1O00337 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC28A1O00337 NMNAT1P5-201ENST00000559657 841 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 MTATP6P25-201ENST00000574491 261 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AP001496.3-201ENST00000580230 913 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC28A1O00337 MIR7109-201ENST00000613748 65 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 AL590410.1-201ENST00000617925 333 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC28A1O00337 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC28A1O00337 AC002525.1-201ENST00000624392 1622 ntBASIC5.29□□□□□ -1.56
SLC28A1O00337 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC28A1O00337 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms