Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TMEM235A6NFC5 NEPNP-201ENST00000404786 1371 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 OR55B1P-203ENST00000641518 2602 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 OR7E101P-201ENST00000400428 513 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 RN7SKP16-201ENST00000410180 299 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 RN7SKP97-201ENST00000410966 333 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AL035660.1-201ENST00000422041 222 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC104333.2-201ENST00000422630 192 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AL354893.1-201ENST00000433735 348 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 CBX1P5-201ENST00000475330 559 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC098818.1-201ENST00000478593 252 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 HSD3BP3-201ENST00000514706 994 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 SNORA70.20-201ENST00000516848 126 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AP000648.1-201ENST00000529682 397 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AL031601.1-201ENST00000605702 394 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC016590.3-201ENST00000611171 753 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AP001642.1-201ENST00000624727 2117 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC073869.10-201ENST00000642016 354 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 AC008691.1-209ENST00000642094 814 ntBASIC4.53□□□□□ -1.68
TMEM235A6NFC5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TMEM235A6NFC5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.53□□□□□ -1.69
TMEM235A6NFC5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 RPS3AP2-201ENST00000407190 754 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 OR6C64P-201ENST00000419708 825 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC113412.1-201ENST00000425840 504 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 MTND6P12-201ENST00000428247 522 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AL512637.1-201ENST00000439523 1231 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 NOP56P2-201ENST00000447491 769 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 RPL5P22-201ENST00000480199 884 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 LSM3P4-201ENST00000502948 309 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 RNU6-615P-201ENST00000516065 106 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 BTG1P1-201ENST00000540396 508 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 MRPS21P7-201ENST00000566937 238 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 LINC00556-201ENST00000569603 412 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 PPATP2-201ENST00000605635 508 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AL139407.1-201ENST00000613826 1175 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 IFIT1P1-201ENST00000400497 1449 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC023421.1-201ENST00000590535 1785 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC000374.1-201ENST00000434698 1745 ntBASIC4.52□□□□□ -1.69
TMEM235A6NFC5 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.52□□□□□ -1.69
TMEM235A6NFC5 AC021242.1-201ENST00000507315 2035 ntBASIC4.51□□□□□ -1.69
TMEM235A6NFC5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM235A6NFC5 ZNF652P1-201ENST00000442420 1309 ntBASIC4.51□□□□□ -1.69
TMEM235A6NFC5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM235A6NFC5 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.51□□□□□ -1.69
TMEM235A6NFC5 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMEM235A6NFC5 RNA5SP223-201ENST00000365174 120 ntBASIC4.51□□□□□ -1.69
TMEM235A6NFC5 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.51□□□□□ -1.69
TMEM235A6NFC5 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TMEM235A6NFC5 MIR589-201ENST00000385238 99 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms