Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC004943.3-201ENST00000624116 600 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC027559.1-201ENST00000636288 271 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 AC068620.4-201ENST00000636730 1182 ntBASIC6.72□□□□□ -1.33
CCDC66A2RUB6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC66A2RUB6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC66A2RUB6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC66A2RUB6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC66A2RUB6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CCDC66A2RUB6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 GNG5P5-201ENST00000420444 220 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AL672212.1-201ENST00000422246 400 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 KATNBL1P3-201ENST00000443475 909 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AL353898.1-201ENST00000444055 238 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC092967.1-201ENST00000449016 481 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 CYCSP42-201ENST00000450823 238 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 PTGES3P5-201ENST00000455109 434 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 RN7SL267P-201ENST00000485107 261 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 COX6B1P4-201ENST00000519826 484 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LRRC6P1-201ENST00000532188 885 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 BTG1P1-201ENST00000540396 508 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 HMGN1P26-201ENST00000558737 303 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC009120.3-201ENST00000563335 499 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 GLYATL1P2-202ENST00000588046 902 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 VN1R78P-201ENST00000597393 564 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 MTCO2P22-201ENST00000603246 681 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC107952.2-201ENST00000606048 486 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AL359513.1-201ENST00000614364 557 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 MIR6085-201ENST00000618314 110 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AL512506.2-201ENST00000624472 458 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC090897.3-201ENST00000636973 1157 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 OR8G3P-202ENST00000641572 1255 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 BX649567.1-201ENST00000642071 1134 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC009220.2-201ENST00000489759 1751 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AC068870.3-201ENST00000625077 2536 ntBASIC6.71□□□□□ -1.34
CCDC66A2RUB6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CCDC66A2RUB6 AL136984.1-201ENST00000607611 1893 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AC092692.1-201ENST00000623625 2595 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AC010132.4-201ENST00000569883 1368 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AC093909.5-201ENST00000621839 1799 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 RNA5SP140-201ENST00000364524 92 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 U3.52-201ENST00000384034 216 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 FDPSP5-201ENST00000399474 1057 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AL356968.2-201ENST00000412769 1257 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AC022080.2-201ENST00000452932 533 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 RN7SL221P-201ENST00000466190 281 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 RPS12P31-201ENST00000491419 398 ntBASIC6.7□□□□□ -1.34
CCDC66A2RUB6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC66A2RUB6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms