Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNX9Q9Y5X1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC234775.3-201ENST00000564612 656 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC005229.3-201ENST00000603438 323 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 MIR6768-201ENST00000610734 72 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC025574.2-201ENST00000615621 514 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC004158.1-201ENST00000564508 4319 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC093909.5-201ENST00000621839 1799 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 AC104964.3-201ENST00000606115 2860 ntBASIC6□□□□□ -1.45
SNX9Q9Y5X1 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AL158152.1-201ENST00000602652 1435 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC144833.1-201ENST00000567953 4089 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 RN7SKP28-201ENST00000364770 305 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 MIR143-201ENST00000385300 106 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AL009179.1-201ENST00000406085 265 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC019185.1-201ENST00000442718 389 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 OR2A3P-201ENST00000493774 953 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 ST13P12-201ENST00000508958 1094 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 RPL7L1P4-201ENST00000513004 707 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 PMS2P3-207ENST00000529061 717 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC010487.1-201ENST00000594408 1172 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 AC092451.3-201ENST00000625067 1343 ntBASIC5.99□□□□□ -1.45
SNX9Q9Y5X1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 SNORA51.1-201ENST00000363243 140 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 RNU4-2-201ENST00000365668 141 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AL391422.1-201ENST00000402155 436 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 OR3A2-201ENST00000408891 1076 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 RNF10P1-201ENST00000418589 369 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 NANOGP9-201ENST00000439890 892 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AL513343.1-201ENST00000451818 792 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC018638.3-201ENST00000461273 132 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC011411.1-201ENST00000509592 876 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC015720.2-201ENST00000567709 334 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC012616.1-201ENST00000600294 197 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AC132068.1-201ENST00000623805 459 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 MTCO1P11-201ENST00000429111 1528 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 BCORP1-203ENST00000513194 5093 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.98□□□□□ -1.45
SNX9Q9Y5X1 MT-RNR2-201ENST00000387347 1559 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AL121886.1-201ENST00000358609 435 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms