Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 RPS26P24-201ENST00000497656 331 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC112191.2-201ENST00000522428 333 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AP004607.2-201ENST00000533949 322 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC135626.1-201ENST00000556983 435 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 RNF19BPY-201ENST00000458209 1550 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 AC002525.1-201ENST00000624392 1622 ntBASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS29Q9UBQ0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC099654.3-201ENST00000447087 1546 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 RPL5P25-201ENST00000441148 775 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 HMGN1P36-201ENST00000446623 298 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 OR52E3P-201ENST00000452083 936 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AL035090.1-201ENST00000454835 332 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 RN7SL51P-201ENST00000468230 285 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC090602.1-201ENST00000469695 252 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 IMPA1P1-201ENST00000510718 842 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC016559.2-201ENST00000510759 359 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 MIR1273E-201ENST00000581165 102 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 FO393422.1-201ENST00000603908 708 ntBASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VPS29Q9UBQ0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 OR9G4-201ENST00000302957 984 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 RNA5SP319-201ENST00000362768 119 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 RN7SKP153-201ENST00000365026 316 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 PEX12P1-201ENST00000400284 1048 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 PRUNEP1-201ENST00000425846 705 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 GAPDHP14-201ENST00000450472 937 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC090638.1-201ENST00000498296 909 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 MIR6778-201ENST00000617912 73 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms