Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC211433.2-201ENST00000608433 387 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SDR42E1P1-201ENST00000611327 477 ntBASIC5.19□□□□□ -1.58
CCDC88CQ9P219 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC88CQ9P219 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 RN7SKP273-201ENST00000411392 314 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 CRIP1P1-201ENST00000427567 185 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 GAPDHP25-201ENST00000447061 1001 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 RN7SL197P-201ENST00000466981 299 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 OR4A46P-201ENST00000527255 933 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 NMNAT1P5-201ENST00000559657 841 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC126915.2-201ENST00000610957 190 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC073869.10-201ENST00000642016 354 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 RPS27AP6-201ENST00000427962 448 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 OR11H3P-201ENST00000554547 982 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC083837.1-201ENST00000565297 2994 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 MIR6826-201ENST00000617808 98 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC135068.5-201ENST00000624197 983 ntBASIC5.18□□□□□ -1.58
CCDC88CQ9P219 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC88CQ9P219 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 SPTLC1P2-201ENST00000407089 121 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AC016769.2-201ENST00000414815 475 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 CNOT7P2-201ENST00000441051 832 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 RN7SKP99-201ENST00000517028 307 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AGGF1P7-201ENST00000562369 913 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AC008536.1-201ENST00000602872 669 ntBASIC5.17□□□□□ -1.58
CCDC88CQ9P219 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC88CQ9P219 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 MIR551A-201ENST00000385042 96 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RPL11P3-201ENST00000395256 523 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RPSAP50-201ENST00000481955 852 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC105420.1-201ENST00000504389 582 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 HMGB1P44-201ENST00000508597 572 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC093815.1-201ENST00000508637 280 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 OR4A43P-201ENST00000532938 908 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC073869.8-201ENST00000641806 335 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 LINC01739-205ENST00000641890 573 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC005294.1-201ENST00000355509 281 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 MIR223-201ENST00000385204 110 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RPL21P67-201ENST00000402896 478 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AL133482.1-201ENST00000415988 498 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RBMY2QP-201ENST00000429799 1147 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 RPL7L1P9-201ENST00000431298 745 ntBASIC5.16□□□□□ -1.58
CCDC88CQ9P219 AC138761.5-201ENST00000433967 325 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms