Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AP003080.1-202ENST00000526526 915 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 IGBP1P1-201ENST00000554337 1009 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 MIR3614-201ENST00000581261 86 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 BMS1P7-201ENST00000602440 1052 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AL135786.2-201ENST00000608422 615 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC019131.2-201ENST00000609071 870 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC004241.3-201ENST00000611728 517 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 CU639417.4-201ENST00000623928 207 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC008691.1-209ENST00000642094 814 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
BLOC1S4Q9NUP1 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.21□□□□□ -1.41
BLOC1S4Q9NUP1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.21□□□□□ -1.41
BLOC1S4Q9NUP1 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 RNA5SP510-201ENST00000364697 99 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 RNU6-152P-201ENST00000384037 107 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 HMGB3P7-201ENST00000400214 611 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 MTCYBP7-201ENST00000419540 1134 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 RPL34P3-201ENST00000421454 338 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL133173.1-201ENST00000423458 397 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL590623.1-201ENST00000427864 105 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC138761.5-201ENST00000433967 325 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 OR6D1P-201ENST00000436165 939 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC002504.1-201ENST00000438281 691 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 GLUD1P3-202ENST00000508551 200 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC122134.1-201ENST00000565664 1104 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 KATNBL1P1-201ENST00000605192 748 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC073111.2-201ENST00000605657 1075 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 AC097461.1-201ENST00000568928 2821 ntBASIC6.21□□□□□ -1.42
BLOC1S4Q9NUP1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 MT-RNR2-201ENST00000387347 1559 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 OR5T3-201ENST00000303059 1023 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 RNA5SP453-201ENST00000362503 119 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 RNU4-7P-201ENST00000364758 141 ntBASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BLOC1S4Q9NUP1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms