Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 SNORA74A-201ENST00000364089 198 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 RNU1-106P-201ENST00000384382 164 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 SNORD56.6-201ENST00000384569 71 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AC016769.2-201ENST00000414815 475 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 NPM1P22-201ENST00000427761 952 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 LINC02210-201ENST00000444561 288 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 BX284632.1-201ENST00000478218 541 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 RNA5SP373-201ENST00000517271 95 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 OR8G3P-201ENST00000533406 921 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AC084824.2-201ENST00000548906 345 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 MIR7155-201ENST00000615925 56 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 AC074101.1-201ENST00000637861 241 ntBASIC5.84□□□□□ -1.47
NXF3Q9H4D5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NXF3Q9H4D5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NXF3Q9H4D5 AC006206.1-201ENST00000544842 3387 ntBASIC5.84□□□□□ -1.48
NXF3Q9H4D5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
NXF3Q9H4D5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
NXF3Q9H4D5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NXF3Q9H4D5 AC140479.2-201ENST00000421567 3130 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 DBIP1-201ENST00000401435 260 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 RPL23AP27-201ENST00000415161 451 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 GAPDHP58-201ENST00000438477 1006 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AC073072.2-201ENST00000447425 348 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AC104634.1-201ENST00000452720 462 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 RPSAP50-201ENST00000481955 852 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AL121612.2-201ENST00000612261 482 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 AC090527.3-201ENST00000619041 548 ntBASIC5.83□□□□□ -1.48
NXF3Q9H4D5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NXF3Q9H4D5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 SETP9-201ENST00000423837 832 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AC093655.2-201ENST00000425735 631 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AL590399.4-201ENST00000436561 601 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AL389915.2-201ENST00000454576 441 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 NDUFA5P12-201ENST00000503796 343 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 HMGN2P6-201ENST00000551091 273 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AC015712.7-201ENST00000615211 635 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AL360270.2-201ENST00000562952 5985 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms