Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC005005.4-201ENST00000623789 16698 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 RN7SKP160-201ENST00000363804 340 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 RNA5SP132-201ENST00000364725 118 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 RN7SKP124-201ENST00000364730 341 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 GNG5P2-201ENST00000372054 207 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 MARK2P12-201ENST00000420129 585 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 HSPE1P16-201ENST00000426640 348 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 NPM1P22-201ENST00000427761 952 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL365220.1-201ENST00000432923 399 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC012075.1-201ENST00000436549 580 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC096775.1-201ENST00000437724 448 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL390119.1-201ENST00000440329 312 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 OSTCP1-201ENST00000455507 450 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC079080.1-201ENST00000479841 822 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 RPS4XP14-201ENST00000493072 781 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AP000926.3-201ENST00000497201 299 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC105384.2-201ENST00000508433 640 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL671862.1-201ENST00000515851 349 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 RN7SKP5-201ENST00000517045 272 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 TRAV11-201ENST00000539512 339 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 MIR1273E-201ENST00000581165 102 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC079395.2-201ENST00000610982 737 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC090607.5-201ENST00000615692 224 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC069234.4-201ENST00000621276 412 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AC007683.2-201ENST00000624681 714 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 CR382285.2-201ENST00000624662 1495 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 AL606537.1-201ENST00000607258 2011 ntBASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
OPN3Q9H1Y3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AC005224.3-201ENST00000584683 2140 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL356968.2-201ENST00000412769 1257 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 RPS6P23-201ENST00000413224 722 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 Z68694.1-201ENST00000413929 841 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AC013268.2-201ENST00000420753 337 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 HMGN2P27-201ENST00000427352 270 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 SNRPFP2-201ENST00000440710 251 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AL450996.1-201ENST00000445574 1202 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AP000547.1-201ENST00000454360 617 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 AP002371.1-201ENST00000463604 433 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 SIAH1P1-201ENST00000479411 923 ntBASIC5.03□□□□□ -1.6
OPN3Q9H1Y3 RPS3AP15-201ENST00000483874 781 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms