Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF3BQ9BZI7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AP000534.2-201ENST00000412729 568 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC009506.2-201ENST00000420635 840 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 SETP9-201ENST00000423837 832 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 OR4A43P-201ENST00000532938 908 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 OR8G3P-201ENST00000533406 921 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 OR11H3P-201ENST00000554547 982 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 MRPS21P7-201ENST00000566937 238 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 H3F3BP2-201ENST00000583907 357 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC116651.1-201ENST00000609724 556 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC135068.5-201ENST00000624197 983 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 MIR193BHG-214ENST00000641765 509 ntBASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF3BQ9BZI7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.36
UPF3BQ9BZI7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
UPF3BQ9BZI7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
UPF3BQ9BZI7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
UPF3BQ9BZI7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 YES1P1-201ENST00000418510 1628 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 SNORA16A-201ENST00000384342 137 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AC113412.1-201ENST00000425840 504 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 EEF1B2P6-201ENST00000445713 673 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AL450023.1-201ENST00000450868 751 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 RN7SL466P-201ENST00000497546 295 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AC105420.1-201ENST00000504389 582 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 BX510359.5-201ENST00000515651 304 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 MIR6748-201ENST00000610433 71 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 AC073869.8-201ENST00000641806 335 ntBASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.52□□□□□ -1.37
UPF3BQ9BZI7 LINC02019-201ENST00000608605 2060 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 SSR1P1-201ENST00000407630 814 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC117434.1-201ENST00000419971 836 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC006455.6-201ENST00000426192 893 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC092106.1-201ENST00000444291 373 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 RN7SL72P-201ENST00000460697 269 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 IGBP1P4-201ENST00000503202 879 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 SCARNA20.4-201ENST00000516969 131 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 OR7A8P-201ENST00000595427 913 ntBASIC6.51□□□□□ -1.37
UPF3BQ9BZI7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms