Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM54Q9BYV2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM54Q9BYV2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM54Q9BYV2 SEPT7P7-201ENST00000420492 1301 ntBASIC5.98□□□□□ -1.45
TRIM54Q9BYV2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM54Q9BYV2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM54Q9BYV2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RNU105B-201ENST00000364478 208 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 MIR188-201ENST00000385034 86 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RPL35AP31-201ENST00000418340 337 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RPL7AP51-201ENST00000422016 760 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RPL12P12-201ENST00000424633 501 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL354707.3-201ENST00000427308 331 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL731534.1-201ENST00000434711 269 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC015983.1-201ENST00000441577 373 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL031313.1-201ENST00000448435 256 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL009048.1-201ENST00000450437 298 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 MTND2P8-201ENST00000450555 1025 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 PPP1R11P1-201ENST00000486095 376 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RPL29P23-201ENST00000486188 442 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC083795.1-201ENST00000491760 320 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC090058.1-201ENST00000498788 435 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 RN7SKP265-201ENST00000516448 223 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL049870.4-201ENST00000555741 486 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 MIR132-201ENST00000591554 101 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC092681.3-201ENST00000609463 678 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 HTR1DP1-201ENST00000616500 888 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 MIR6813-201ENST00000621638 56 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 AC099654.15-201ENST00000639802 509 ntBASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM54Q9BYV2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM54Q9BYV2 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.96□□□□□ -1.45
TRIM54Q9BYV2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM54Q9BYV2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM54Q9BYV2 AC016583.1-201ENST00000624221 2431 ntBASIC5.96□□□□□ -1.45
TRIM54Q9BYV2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 RPS15AP30-201ENST00000420976 390 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AC093166.3-201ENST00000448785 303 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AC079080.1-201ENST00000479841 822 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 RN7SL362P-201ENST00000494228 267 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 ZNF519P4-201ENST00000514008 125 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 SNORA19.3-201ENST00000516165 130 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AP001000.1-201ENST00000526843 742 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AL049830.4-201ENST00000555149 351 ntBASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM54Q9BYV2 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms