Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC093775.1-201ENST00000624154 1868 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC018809.2-201ENST00000602436 3823 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC068870.1-201ENST00000563737 2455 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC106872.5-201ENST00000508856 1416 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 RBPJP2-201ENST00000618187 1444 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC079097.1-201ENST00000512187 1399 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC007342.9-201ENST00000623877 1385 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 OR52B3P-201ENST00000314715 928 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 RNA5SP394-201ENST00000364216 119 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 SNORA5.1-201ENST00000384275 131 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 VTI1BP4-201ENST00000427516 527 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 DNAJA1P5-201ENST00000440278 943 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC005297.1-201ENST00000444765 862 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 HAUS1P1-201ENST00000505275 832 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 RNU6-615P-201ENST00000516065 106 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 OR7E10P-201ENST00000526420 991 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC079064.1-201ENST00000528365 362 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 MIR7853-201ENST00000584820 132 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC015802.2-201ENST00000589690 189 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC007620.3-201ENST00000608131 497 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 AC025574.2-201ENST00000615621 514 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 RMST_5.1-201ENST00000618704 126 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 OR13C1P-202ENST00000641378 2919 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 MTCO1P8-201ENST00000416914 1523 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 VPS35P1-201ENST00000563400 1518 ntBASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDLIM5Q96HC4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 MRE11P1-201ENST00000464884 2127 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AL359715.3-201ENST00000569267 2123 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 RNU1-146P-201ENST00000364015 165 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 HMGB1P20-201ENST00000402555 677 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 GAPDHP42-201ENST00000406848 981 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 SLC20A1P1-201ENST00000413906 956 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AL133482.1-201ENST00000415988 498 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 RPL24P2-201ENST00000421023 475 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 NPM1P26-201ENST00000426339 738 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 RPL7P56-201ENST00000429441 717 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 MAPRE1P3-201ENST00000435438 796 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AL359265.1-201ENST00000440296 795 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AC073465.2-201ENST00000440938 498 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 RN7SL741P-201ENST00000482473 289 ntBASIC5.47□□□□□ -1.53
PDLIM5Q96HC4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms