Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 RN7SKP78-201ENST00000364711 318 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 RNU6-729P-201ENST00000384399 107 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 MIR191-201ENST00000384873 92 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 RNA5SP105-201ENST00000391123 113 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 U3.28-201ENST00000391249 210 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 RN7SKP146-201ENST00000410242 334 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 RPS4XP5-201ENST00000419038 768 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 GLUD1P9-201ENST00000420997 1173 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 GAPDHP59-201ENST00000435908 267 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL353662.1-201ENST00000439099 327 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 Z99127.2-201ENST00000441426 334 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 TCEA1P3-201ENST00000443005 880 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL157884.3-201ENST00000448273 1184 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 BUD31P2-201ENST00000449374 300 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 RBMY2TP-201ENST00000451162 947 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 RNU1-88P-201ENST00000459274 128 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 EIF2S2P4-201ENST00000461070 984 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC112484.3-201ENST00000505910 329 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC074029.2-201ENST00000551045 634 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC012414.2-201ENST00000559474 187 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC073111.2-201ENST00000605657 1075 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC005828.7-201ENST00000607331 556 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 FAM27E2-201ENST00000619668 403 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC004808.2-201ENST00000627965 773 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC073488.3-201ENST00000631611 778 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 FRG1EP-201ENST00000634469 770 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL357140.4-201ENST00000636827 412 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 OR11H2-202ENST00000641517 1085 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 GNL2P1-201ENST00000451274 2190 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 MFSD8-239ENST00000641590 2479 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AL360270.2-201ENST00000562952 5985 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 AC008627.1-201ENST00000517511 1704 ntBASIC5.03□□□□□ -1.6
RFT1Q96AA3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFT1Q96AA3 RNU6-1263P-201ENST00000384601 106 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 VDAC2P1-201ENST00000399358 958 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AL590623.1-201ENST00000427864 105 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 HMGB3P10-201ENST00000434734 572 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 Z84478.1-201ENST00000438230 1219 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC023141.8-201ENST00000442554 208 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 LINC02210-201ENST00000444561 288 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 AL445466.1-201ENST00000448432 357 ntBASIC5.02□□□□□ -1.61
RFT1Q96AA3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.02□□□□□ -1.61
RFT1Q96AA3 SNORD125-201ENST00000459538 96 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms