Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC009237.13-201ENST00000603193 276 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC067773.1-201ENST00000603284 1094 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC108738.1-201ENST00000603703 237 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 MIR7109-201ENST00000613748 65 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AL034549.2-201ENST00000618285 3373 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC112255.1-201ENST00000624070 2493 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 OR7E25P-201ENST00000344844 931 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RNA5SP394-201ENST00000364216 119 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RN7SKP275-201ENST00000364626 301 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RN7SKP69-201ENST00000365390 305 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 LYPLA1P3-201ENST00000402650 695 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC007161.1-204ENST00000423039 460 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 CDY8P-201ENST00000428380 1279 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 CDY20P-201ENST00000447528 1279 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 PSAT1P4-201ENST00000466500 526 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC098583.1-201ENST00000480875 255 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC091912.1-201ENST00000511351 248 ntBASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLHC1Q8NHS4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC100757.1-201ENST00000616872 1835 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 MIR375-201ENST00000362103 64 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC233289.1-201ENST00000403700 508 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC079809.1-201ENST00000415468 276 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 NPM1P22-201ENST00000427761 952 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 DNAJA1P5-201ENST00000440278 943 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC083899.1-201ENST00000454465 3819 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 RNU6-615P-201ENST00000516065 106 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 OR8G3P-201ENST00000533406 921 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC084759.1-201ENST00000561168 290 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 H3F3BP2-201ENST00000583907 357 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 AL138820.1-201ENST00000617901 5305 ntBASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLHC1Q8NHS4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms