Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 EIF1P5-201ENST00000585002 234 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC026741.1-201ENST00000605892 482 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC092266.1-201ENST00000610958 165 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC073592.6-201ENST00000624271 415 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AC022164.1-201ENST00000568767 2673 ntBASIC5.91□□□□□ -1.46
VRK3Q8IV63 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.91□□□□□ -1.46
VRK3Q8IV63 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VRK3Q8IV63 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 MAPK10-261ENST00000641050 3109 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 RN7SKP149-201ENST00000363008 344 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 RN7SKP187-201ENST00000365536 330 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 OR8V1P-201ENST00000395193 873 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL355615.1-201ENST00000406187 641 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 SEPT2P1-201ENST00000419651 180 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 MFSD13B-201ENST00000420133 1290 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AMYP1-201ENST00000440059 1023 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC044797.1-201ENST00000445744 679 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL355032.1-201ENST00000472981 438 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 RN7SL170P-201ENST00000487098 295 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 CCDC11P1-201ENST00000503137 1162 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AF213884.2-201ENST00000510417 903 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 RNA5SP340-201ENST00000517132 107 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 RNU6-889P-201ENST00000517189 103 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC021733.2-201ENST00000518830 497 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 OR56A7P-201ENST00000524865 941 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VRK3Q8IV63 BCAS2P1-201ENST00000528022 632 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 OR4A42P-201ENST00000531397 938 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 DUXAP6-201ENST00000553858 601 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC027455.1-201ENST00000574104 594 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AL133247.2-201ENST00000603236 482 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AP001437.1-201ENST00000608783 456 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC097641.3-201ENST00000613523 464 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 MIR7109-201ENST00000613748 65 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC004232.3-201ENST00000622977 525 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC017037.3-201ENST00000625016 472 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC083865.1-201ENST00000636634 831 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC006927.3-201ENST00000638789 384 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 AC006927.2-201ENST00000639256 389 ntBASIC5.9□□□□□ -1.46
VRK3Q8IV63 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 AC034229.2-201ENST00000566945 2508 ntBASIC5.9□□□□□ -1.47
VRK3Q8IV63 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VRK3Q8IV63 AL731532.1-201ENST00000623972 4236 ntBASIC5.9□□□□□ -1.47
VRK3Q8IV63 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
VRK3Q8IV63 IFIT1P1-201ENST00000400497 1449 ntBASIC5.9□□□□□ -1.47
VRK3Q8IV63 AC093225.1-201ENST00000506867 1408 ntBASIC5.9□□□□□ -1.47
VRK3Q8IV63 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms