Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC007383.1-201ENST00000445875 636 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 GAPDHP14-201ENST00000450472 937 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 NPM1P29-201ENST00000483112 803 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 RPS27P20-201ENST00000492051 246 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 SNRPCP11-201ENST00000492453 205 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 MTCO3P27-201ENST00000514397 196 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC022826.1-201ENST00000519383 805 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC004923.2-201ENST00000529649 369 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC084824.2-201ENST00000548906 345 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AL158211.1-201ENST00000566763 763 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC005021.1-201ENST00000608730 355 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC090912.3-201ENST00000609775 533 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AL021918.2-201ENST00000613415 194 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC010608.3-201ENST00000625048 527 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AP003485.1-201ENST00000625093 753 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AL445984.1-201ENST00000637834 659 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 RBPJP7-201ENST00000442803 1447 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 RBPJP5-201ENST00000449433 1447 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC005005.4-201ENST00000623789 16698 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 TCP1P3-201ENST00000414406 1498 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 SNORA70.6-201ENST00000383934 134 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 RNU4-27P-201ENST00000410889 139 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL121878.1-201ENST00000418638 859 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC092865.3-201ENST00000425390 1026 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 VN1R21P-201ENST00000426703 765 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 BX119321.1-201ENST00000428912 797 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 RPSAP65-201ENST00000429660 595 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL445928.1-201ENST00000435545 222 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 RNFT1P2-201ENST00000443064 757 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC010240.2-201ENST00000445363 1205 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC023245.1-201ENST00000468501 517 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 RPSAP37-201ENST00000470913 821 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC005017.1-201ENST00000482002 490 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 OR7E157P-201ENST00000494376 911 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 OR7E99P-201ENST00000505750 922 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 GLUD1P3-202ENST00000508551 200 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 OR4A17P-201ENST00000526032 904 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 RN7SL230P-201ENST00000580835 303 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC012254.3-201ENST00000591183 2117 ntBASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.22□□□□□ -1.57
SHFQ7M4L6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms