Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CBX1P3-201ENST00000413296 527 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 TMEM183AP1-205ENST00000432739 290 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 SUMO2P1-206ENST00000445436 284 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AL389915.2-201ENST00000454576 441 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 RN7SL447P-201ENST00000494711 245 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 MTND6P2-201ENST00000512226 524 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 PMS2P3-207ENST00000529061 717 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AC068870.2-201ENST00000620635 389 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 LINC01739-205ENST00000641890 573 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 TET1P1-201ENST00000426627 2301 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 HSPD1P7-201ENST00000447985 1686 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 SNORA67-201ENST00000384423 137 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 RN7SKP125-201ENST00000410481 302 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 PA2G4P6-201ENST00000438325 1197 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC104634.1-201ENST00000452720 462 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AZGP1P2-201ENST00000454506 345 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC091685.2-201ENST00000454924 864 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC090114.3-201ENST00000479267 829 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 IGLV2-34-201ENST00000490007 283 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 OR5AM1P-201ENST00000532136 1032 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC006116.3-201ENST00000592968 361 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 LSM1P2-201ENST00000604911 322 ntBASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM1Q2M3G4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 UGT2B24P-201ENST00000514441 1597 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 MTCO1P7-201ENST00000419523 1542 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AC068769.1-201ENST00000474767 2426 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AC005225.5-201ENST00000623547 2225 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 GNG5P2-201ENST00000372054 207 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 RPS26P13-201ENST00000419030 330 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 RPS23P9-201ENST00000448848 438 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 RPS17P5-201ENST00000498293 408 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AC147055.3-201ENST00000510547 851 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 SCARNA16.4-201ENST00000516956 187 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AL163952.1-202ENST00000569625 600 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 TAS2R6P-201ENST00000605022 826 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 AL121612.2-201ENST00000612261 482 ntBASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM1Q2M3G4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms