Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHRNB3Q05901 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNB3Q05901 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNB3Q05901 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.21□□□□□ -1.57
CHRNB3Q05901 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNB3Q05901 AC007342.5-201ENST00000571340 2142 ntBASIC5.21□□□□□ -1.57
CHRNB3Q05901 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNB3Q05901 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 OR1L6-202ENST00000373684 1044 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 RNU6-167P-201ENST00000384292 106 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC016772.1-201ENST00000444170 1261 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 RPL31P15-201ENST00000449770 338 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC018638.3-201ENST00000461273 132 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC073610.1-201ENST00000489971 396 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 RN7SL57P-201ENST00000493687 290 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 CDC42P3-201ENST00000518493 633 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC092709.1-201ENST00000521355 1045 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC009237.13-201ENST00000603193 276 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 MIR4302-201ENST00000638058 60 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 SMG1P4-204ENST00000523028 4131 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CHRNB3Q05901 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNB3Q05901 AL034549.2-201ENST00000618285 3373 ntBASIC5.21□□□□□ -1.58
CHRNB3Q05901 AC100757.1-201ENST00000616872 1835 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC011503.2-201ENST00000594230 1500 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 RNA5SP477-201ENST00000362639 119 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 RPS6P23-201ENST00000413224 722 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 EEF1B2P8-201ENST00000414101 671 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 AL035660.1-201ENST00000422041 222 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 RPL19P16-201ENST00000433839 588 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 GAPDHP14-201ENST00000450472 937 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 HLA-DPA3-207ENST00000454398 229 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 CST12P-201ENST00000457644 362 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AL122020.1-201ENST00000472287 459 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC016559.2-201ENST00000510759 359 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC006499.4-201ENST00000510947 694 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC020937.1-201ENST00000519677 1013 ntBASIC5.2□□□□□ -1.58
CHRNB3Q05901 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNB3Q05901 AC092121.1-201ENST00000569452 202 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms