Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC007614.5-201ENST00000623424 8892 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKDCP78527 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKDCP78527 AL137845.2-201ENST00000444292 988 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 RPL12P39-201ENST00000455456 496 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKDCP78527 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKDCP78527 AC002044.3-201ENST00000623314 541 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PRKDCP78527 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PRKDCP78527 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PRKDCP78527 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 VN1R21P-201ENST00000426703 765 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 TCEA1P1-201ENST00000449716 880 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 SNORA31.9-201ENST00000516429 84 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.67□□□□□ -1.82
PRKDCP78527 AC137627.1-201ENST00000545761 289 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 AP000843.1-201ENST00000624880 701 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 AC010733.2-201ENST00000589496 5702 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKDCP78527 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
PRKDCP78527 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 OR7E25P-202ENST00000641088 5937 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC140479.2-201ENST00000421567 3130 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 RNA5SP509-201ENST00000364577 119 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 Z97832.1-201ENST00000402490 328 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 RPS4XP16-201ENST00000427198 791 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKDCP78527 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PRKDCP78527 REG1CP-206ENST00000447469 496 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC041039.1-201ENST00000485656 536 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AC106806.2-201ENST00000509365 500 ntBASIC3.67□□□□□ -1.82
PRKDCP78527 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.67□□□□□ -1.82
PRKDCP78527 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKDCP78527 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKDCP78527 USP24P1-201ENST00000433802 779 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AC016831.4-201ENST00000438302 307 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 ARL2BPP10-201ENST00000446487 531 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKDCP78527 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 AC006115.2-201ENST00000596823 202 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 RNU1-74P-201ENST00000384108 171 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.66□□□□□ -1.82
PRKDCP78527 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 AC023818.1-201ENST00000498379 384 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PRKDCP78527 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.66□□□□□ -1.82
PRKDCP78527 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKDCP78527 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PRKDCP78527 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.66□□□□□ -1.82
PRKDCP78527 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKDCP78527 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKDCP78527 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms