Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC023245.1-201ENST00000468501 517 ntBASIC4.81□□□□□ -1.64
UBA52P62987 RN7SL57P-201ENST00000493687 290 ntBASIC4.81□□□□□ -1.64
UBA52P62987 RN7SL466P-201ENST00000497546 295 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.81□□□□□ -1.64
UBA52P62987 AC109481.1-201ENST00000509173 282 ntBASIC4.81□□□□□ -1.64
UBA52P62987 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
UBA52P62987 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.81□□□□□ -1.64
UBA52P62987 AC006530.1-201ENST00000555980 571 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AC119403.2-201ENST00000590960 598 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AC006272.2-201ENST00000594725 163 ntBASIC4.81□□□□□ -1.64
UBA52P62987 SUMO2P15-201ENST00000604285 278 ntBASIC4.81□□□□□ -1.64
UBA52P62987 NANOGP3-201ENST00000605855 286 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AL021918.2-201ENST00000613415 194 ntBASIC4.81□□□□□ -1.64
UBA52P62987 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
UBA52P62987 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.81□□□□□ -1.64
UBA52P62987 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
UBA52P62987 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 Z83820.1-201ENST00000456978 1499 ntBASIC4.81□□□□□ -1.64
UBA52P62987 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
UBA52P62987 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
UBA52P62987 PDZK1P1-202ENST00000425209 1350 ntBASIC4.8□□□□□ -1.64
UBA52P62987 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
UBA52P62987 RNU105B-201ENST00000364478 208 ntBASIC4.8□□□□□ -1.64
UBA52P62987 RNA5SP132-201ENST00000364725 118 ntBASIC4.8□□□□□ -1.64
UBA52P62987 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 AC096921.1-201ENST00000411661 375 ntBASIC4.8□□□□□ -1.64
UBA52P62987 VN1R21P-201ENST00000426703 765 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.8□□□□□ -1.64
UBA52P62987 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 AC002504.1-201ENST00000438281 691 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AL512593.1-201ENST00000444758 779 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.8□□□□□ -1.64
UBA52P62987 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.8□□□□□ -1.64
UBA52P62987 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.8□□□□□ -1.64
UBA52P62987 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.8□□□□□ -1.64
UBA52P62987 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.8□□□□□ -1.64
UBA52P62987 AC110056.1-201ENST00000525759 911 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.8□□□□□ -1.64
UBA52P62987 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.8□□□□□ -1.64
UBA52P62987 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.8□□□□□ -1.64
UBA52P62987 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
UBA52P62987 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 MIR4505-201ENST00000582238 73 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 FO393422.1-201ENST00000603908 708 ntBASIC4.8□□□□□ -1.64
UBA52P62987 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.8□□□□□ -1.64
UBA52P62987 AC211433.2-201ENST00000608433 387 ntBASIC4.8□□□□□ -1.64
UBA52P62987 MIR6719-201ENST00000622428 87 ntBASIC4.8□□□□□ -1.64
UBA52P62987 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.8□□□□□ -1.64
UBA52P62987 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
UBA52P62987 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBA52P62987 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
UBA52P62987 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.79□□□□□ -1.64
UBA52P62987 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBA52P62987 MUC2-202ENST00000613187 4845 ntBASIC4.79□□□□□ -1.64
UBA52P62987 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
UBA52P62987 MIR105-2-201ENST00000385083 81 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AK4P4-201ENST00000419465 646 ntBASIC4.79□□□□□ -1.64
UBA52P62987 KIF4CP-201ENST00000422742 1279 ntBASIC4.79□□□□□ -1.64
UBA52P62987 AL355433.1-201ENST00000422804 300 ntBASIC4.79□□□□□ -1.64
UBA52P62987 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.79□□□□□ -1.64
UBA52P62987 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.79□□□□□ -1.64
UBA52P62987 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.79□□□□□ -1.64
UBA52P62987 AC073909.1-201ENST00000447112 999 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms