Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC3.92□□□□□ -1.78
CKS1BP61024 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 AL589765.6-201ENST00000601909 549 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 AL512413.1-201ENST00000606489 382 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC023813.4-201ENST00000607580 580 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC012511.1-201ENST00000608140 449 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC009237.17-201ENST00000618111 748 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 MAPK10-320ENST00000641462 6696 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CKS1BP61024 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 RPL23AP48-201ENST00000406913 488 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC3.91□□□□□ -1.78
CKS1BP61024 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC234771.2-201ENST00000445718 597 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AL157385.1-201ENST00000446973 268 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AC002553.3-201ENST00000453002 341 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 RN7SL790P-201ENST00000474043 298 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AC006539.1-201ENST00000481419 501 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 RPL38P3-201ENST00000484463 213 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AGGF1P3-201ENST00000493675 1213 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 MYL12BP2-201ENST00000503948 512 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 VWA8P1-201ENST00000510889 176 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AC108103.1-201ENST00000511286 446 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 OSTC-204ENST00000512478 663 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC138938.1-201ENST00000515431 782 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 RN7SKP46-201ENST00000515942 234 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC3.91□□□□□ -1.78
CKS1BP61024 IGHV7-34-1-201ENST00000519200 350 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 AC110056.1-201ENST00000525759 911 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC005632.2-201ENST00000564271 828 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS1BP61024 IMMP1LP3-201ENST00000604197 224 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 NDUFB9P1-201ENST00000604683 510 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 HIRAP1-201ENST00000605318 787 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 RPSAP75-201ENST00000605848 301 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 AL139099.4-201ENST00000614802 114 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS1BP61024 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS1BP61024 AC011933.2-201ENST00000578539 2790 ntBASIC3.91□□□□□ -1.78
CKS1BP61024 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CKS1BP61024 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CKS1BP61024 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 AC012020.1-201ENST00000624541 1728 ntBASIC3.9□□□□□ -1.78
CKS1BP61024 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS1BP61024 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS1BP61024 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CKS1BP61024 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CKS1BP61024 AC017079.1-201ENST00000333650 415 ntBASIC3.9□□□□□ -1.79
CKS1BP61024 RNA5SP28-201ENST00000363841 119 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms