Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CLDN6P56747 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
CLDN6P56747 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLDN6P56747 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN6P56747 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 RNU4-4P-201ENST00000364588 130 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 MIR141-201ENST00000384975 95 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL121977.1-201ENST00000401636 979 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 AC092651.1-201ENST00000426110 312 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 DSTNP5-201ENST00000427921 523 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL049745.1-201ENST00000433953 286 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN6P56747 AC006466.1-201ENST00000438721 289 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 RPS11P7-201ENST00000442125 465 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL451063.1-201ENST00000450164 1133 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN6P56747 AL389915.2-201ENST00000454576 441 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 RPS23P2-201ENST00000463671 415 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 FTH1P2-201ENST00000466086 412 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AC090589.1-201ENST00000473109 362 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AC090114.3-201ENST00000479267 829 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AC007686.1-201ENST00000488511 463 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 AP000676.2-201ENST00000529711 301 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN6P56747 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN6P56747 AC087783.2-201ENST00000605070 562 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL139041.1-201ENST00000605480 610 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AC109583.2-201ENST00000617367 129 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 AL731566.2-201ENST00000618971 317 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN6P56747 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 AP001153.1-201ENST00000641024 338 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 LINC01739-205ENST00000641890 573 ntBASIC5.32□□□□□ -1.56
CLDN6P56747 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CLDN6P56747 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN6P56747 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 CASC19-281ENST00000642118 1554 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AL359955.1-201ENST00000455242 3275 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 RNA5SP305-201ENST00000362665 119 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 RN7SKP6-201ENST00000364795 319 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 SNORA67-201ENST00000384423 137 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 RNU1-149P-201ENST00000390870 161 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN6P56747 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 HIGD1AP8-201ENST00000453927 274 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC015864.1-201ENST00000496512 544 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AC090058.1-201ENST00000498788 435 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AC105233.1-201ENST00000498840 781 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN6P56747 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC244502.2-201ENST00000543361 851 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AL049779.3-201ENST00000557141 606 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CLDN6P56747 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLDN6P56747 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN6P56747 AC107993.1-201ENST00000591343 684 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 AP002799.1-201ENST00000623552 423 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.31□□□□□ -1.56
CLDN6P56747 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.31□□□□□ -1.56
CLDN6P56747 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
CLDN6P56747 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN6P56747 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms