Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH12P55289 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 GCNT1P4-201ENST00000404096 329 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH12P55289 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 AC015983.1-201ENST00000441577 373 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AC023141.8-201ENST00000442554 208 ntBASIC5.37□□□□□ -1.55
CDH12P55289 MED28P3-201ENST00000444288 531 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AC092106.1-201ENST00000444291 373 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 AC023271.1-201ENST00000445936 1090 ntBASIC5.37□□□□□ -1.55
CDH12P55289 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 AC118282.1-201ENST00000506408 765 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 GAPDHP62-201ENST00000515313 990 ntBASIC5.37□□□□□ -1.55
CDH12P55289 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH12P55289 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 AC092332.1-201ENST00000563684 829 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 AP005119.1-201ENST00000580956 292 ntBASIC5.37□□□□□ -1.55
CDH12P55289 MIR5010-201ENST00000582846 120 ntBASIC5.37□□□□□ -1.55
CDH12P55289 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 AC068620.3-201ENST00000602749 560 ntBASIC5.37□□□□□ -1.55
CDH12P55289 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH12P55289 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 AC004477.3-201ENST00000614061 590 ntBASIC5.37□□□□□ -1.55
CDH12P55289 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH12P55289 AC008993.2-201ENST00000631744 806 ntBASIC5.37□□□□□ -1.55
CDH12P55289 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.37□□□□□ -1.55
CDH12P55289 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH12P55289 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH12P55289 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 AC104964.3-201ENST00000606115 2860 ntBASIC5.36□□□□□ -1.55
CDH12P55289 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH12P55289 SELENOWP1-201ENST00000322792 252 ntBASIC5.36□□□□□ -1.55
CDH12P55289 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH12P55289 RNU6-1257P-201ENST00000384625 110 ntBASIC5.36□□□□□ -1.55
CDH12P55289 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 RN7SKP86-201ENST00000410454 332 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 AL356968.2-201ENST00000412769 1257 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH12P55289 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH12P55289 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 RNGTTP1-201ENST00000420965 728 ntBASIC5.36□□□□□ -1.55
CDH12P55289 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 MTND4LP13-201ENST00000425022 298 ntBASIC5.36□□□□□ -1.55
CDH12P55289 VN1R21P-201ENST00000426703 765 ntBASIC5.36□□□□□ -1.55
CDH12P55289 BMS1P10-201ENST00000443754 1120 ntBASIC5.36□□□□□ -1.55
CDH12P55289 RPL5P7-201ENST00000444235 813 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AL157884.3-201ENST00000448273 1184 ntBASIC5.36□□□□□ -1.55
CDH12P55289 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 MEMO1P4-201ENST00000453590 386 ntBASIC5.36□□□□□ -1.55
CDH12P55289 CTSLP6-201ENST00000458273 1002 ntBASIC5.36□□□□□ -1.55
CDH12P55289 RN7SL197P-201ENST00000466981 299 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC092865.4-201ENST00000477936 615 ntBASIC5.36□□□□□ -1.55
CDH12P55289 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.36□□□□□ -1.55
CDH12P55289 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH12P55289 AL158068.1-201ENST00000506116 616 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC105384.2-201ENST00000508433 640 ntBASIC5.36□□□□□ -1.55
CDH12P55289 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH12P55289 AP003355.1-201ENST00000518956 587 ntBASIC5.36□□□□□ -1.55
CDH12P55289 AC104115.2-201ENST00000523026 687 ntBASIC5.36□□□□□ -1.55
CDH12P55289 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH12P55289 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH12P55289 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH12P55289 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH12P55289 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms