Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 AC093225.1-201ENST00000506867 1408 ntBASIC6.2□□□□□ -1.42
COPB1P53618 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COPB1P53618 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.2□□□□□ -1.42
COPB1P53618 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.2□□□□□ -1.42
COPB1P53618 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 NDUFB4P8-201ENST00000435351 367 ntBASIC6.2□□□□□ -1.42
COPB1P53618 NANOGP9-201ENST00000439890 892 ntBASIC6.2□□□□□ -1.42
COPB1P53618 HMGN1P2-201ENST00000445197 310 ntBASIC6.2□□□□□ -1.42
COPB1P53618 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.2□□□□□ -1.42
COPB1P53618 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 AC023194.2-201ENST00000465398 406 ntBASIC6.2□□□□□ -1.42
COPB1P53618 AL122020.1-201ENST00000472287 459 ntBASIC6.2□□□□□ -1.42
COPB1P53618 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
COPB1P53618 RN7SL570P-201ENST00000484405 292 ntBASIC6.2□□□□□ -1.42
COPB1P53618 RPL32P33-201ENST00000487023 394 ntBASIC6.2□□□□□ -1.42
COPB1P53618 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 TPT1P8-201ENST00000510120 555 ntBASIC6.2□□□□□ -1.42
COPB1P53618 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 SEPT10P1-201ENST00000517342 1162 ntBASIC6.2□□□□□ -1.42
COPB1P53618 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.2□□□□□ -1.42
COPB1P53618 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.2□□□□□ -1.42
COPB1P53618 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.2□□□□□ -1.42
COPB1P53618 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.2□□□□□ -1.42
COPB1P53618 AC106785.3-201ENST00000564064 847 ntBASIC6.2□□□□□ -1.42
COPB1P53618 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.2□□□□□ -1.42
COPB1P53618 FAM60CP-201ENST00000591086 664 ntBASIC6.2□□□□□ -1.42
COPB1P53618 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 AC091046.2-201ENST00000620775 665 ntBASIC6.2□□□□□ -1.42
COPB1P53618 AP006248.3-201ENST00000623580 594 ntBASIC6.2□□□□□ -1.42
COPB1P53618 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.2□□□□□ -1.42
COPB1P53618 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.2□□□□□ -1.42
COPB1P53618 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COPB1P53618 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COPB1P53618 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
COPB1P53618 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COPB1P53618 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COPB1P53618 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 OR5W1P-201ENST00000423705 938 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.19□□□□□ -1.42
COPB1P53618 AC007679.3-201ENST00000434035 414 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC013410.1-201ENST00000436223 1232 ntBASIC6.19□□□□□ -1.42
COPB1P53618 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 AL645638.1-201ENST00000440519 361 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 PPIAP27-201ENST00000453800 265 ntBASIC6.19□□□□□ -1.42
COPB1P53618 C1DP3-201ENST00000455013 423 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC009963.3-201ENST00000458090 486 ntBASIC6.19□□□□□ -1.42
COPB1P53618 NDUFA5P5-201ENST00000468361 342 ntBASIC6.19□□□□□ -1.42
COPB1P53618 SNRPCP3-201ENST00000474888 476 ntBASIC6.19□□□□□ -1.42
COPB1P53618 ATP5LP5-201ENST00000483050 299 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.19□□□□□ -1.42
COPB1P53618 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 AC117525.1-201ENST00000515228 503 ntBASIC6.19□□□□□ -1.42
COPB1P53618 RN7SKP5-201ENST00000517045 272 ntBASIC6.19□□□□□ -1.42
COPB1P53618 IGLV3-24-201ENST00000517477 197 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 AC138701.1-201ENST00000524329 714 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AP003396.4-201ENST00000527574 265 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.19□□□□□ -1.42
COPB1P53618 HSPE1P2-201ENST00000554777 306 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.19□□□□□ -1.42
COPB1P53618 AC007956.1-201ENST00000555623 542 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
COPB1P53618 OR1AB1P-201ENST00000585564 761 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AL138895.2-201ENST00000603019 178 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC120053.1-201ENST00000607706 736 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AL139124.1-201ENST00000609123 421 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AC010632.3-201ENST00000611377 369 ntBASIC6.19□□□□□ -1.42
COPB1P53618 AL162574.1-201ENST00000615702 950 ntBASIC6.19□□□□□ -1.42
COPB1P53618 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.19□□□□□ -1.42
COPB1P53618 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.19□□□□□ -1.42
COPB1P53618 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COPB1P53618 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms