Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MSH6P52701 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.53□□□□□ -1.2
MSH6P52701 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
MSH6P52701 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 AL033543.1-201ENST00000623440 13454 ntBASIC7.53□□□□□ -1.2
MSH6P52701 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.53□□□□□ -1.2
MSH6P52701 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
MSH6P52701 RNU2-50P-201ENST00000410494 143 ntBASIC7.53□□□□□ -1.2
MSH6P52701 GJA6P-201ENST00000415117 1042 ntBASIC7.53□□□□□ -1.2
MSH6P52701 DDX39BP1-205ENST00000422507 192 ntBASIC7.53□□□□□ -1.2
MSH6P52701 RPS23P7-201ENST00000466210 444 ntBASIC7.53□□□□□ -1.2
MSH6P52701 AC103987.1-201ENST00000473394 348 ntBASIC7.53□□□□□ -1.2
MSH6P52701 AC134698.5-201ENST00000519444 336 ntBASIC7.53□□□□□ -1.2
MSH6P52701 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.53□□□□□ -1.2
MSH6P52701 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.53□□□□□ -1.2
MSH6P52701 AP000919.1-201ENST00000582850 985 ntBASIC7.53□□□□□ -1.2
MSH6P52701 MIR6780A-201ENST00000615089 68 ntBASIC7.53□□□□□ -1.2
MSH6P52701 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
MSH6P52701 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
MSH6P52701 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.53□□□□□ -1.2
MSH6P52701 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MSH6P52701 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.52□□□□□ -1.21
MSH6P52701 IRF5P1-201ENST00000504852 2164 ntBASIC7.52□□□□□ -1.21
MSH6P52701 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MSH6P52701 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MSH6P52701 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
MSH6P52701 AC079741.1-201ENST00000321498 212 ntBASIC7.52□□□□□ -1.21
MSH6P52701 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.52□□□□□ -1.21
MSH6P52701 AC092570.3-201ENST00000420113 693 ntBASIC7.52□□□□□ -1.21
MSH6P52701 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.52□□□□□ -1.21
MSH6P52701 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.52□□□□□ -1.21
MSH6P52701 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.52□□□□□ -1.21
MSH6P52701 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.52□□□□□ -1.21
MSH6P52701 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.52□□□□□ -1.21
MSH6P52701 RNA5SP373-201ENST00000517271 95 ntBASIC7.52□□□□□ -1.21
MSH6P52701 PMS2P3-207ENST00000529061 717 ntBASIC7.52□□□□□ -1.21
MSH6P52701 AP006289.1-201ENST00000538089 277 ntBASIC7.52□□□□□ -1.21
MSH6P52701 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
MSH6P52701 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC7.52□□□□□ -1.21
MSH6P52701 AL513327.3-201ENST00000602618 469 ntBASIC7.52□□□□□ -1.21
MSH6P52701 AL356752.1-201ENST00000615844 593 ntBASIC7.52□□□□□ -1.21
MSH6P52701 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
MSH6P52701 AC005225.5-201ENST00000623547 2225 ntBASIC7.52□□□□□ -1.21
MSH6P52701 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.52□□□□□ -1.21
MSH6P52701 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
MSH6P52701 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
MSH6P52701 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.52□□□□□ -1.21
MSH6P52701 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.52□□□□□ -1.21
MSH6P52701 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
MSH6P52701 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MSH6P52701 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
MSH6P52701 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MSH6P52701 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.51□□□□□ -1.21
MSH6P52701 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
MSH6P52701 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MSH6P52701 MIR23A-201ENST00000385245 73 ntBASIC7.51□□□□□ -1.21
MSH6P52701 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.51□□□□□ -1.21
MSH6P52701 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.51□□□□□ -1.21
MSH6P52701 HSPD1P12-201ENST00000429127 1069 ntBASIC7.51□□□□□ -1.21
MSH6P52701 AL596266.1-201ENST00000448132 400 ntBASIC7.51□□□□□ -1.21
MSH6P52701 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC7.51□□□□□ -1.21
MSH6P52701 AL161747.1-201ENST00000480068 358 ntBASIC7.51□□□□□ -1.21
MSH6P52701 GTF2F2P1-201ENST00000511083 675 ntBASIC7.51□□□□□ -1.21
MSH6P52701 TOMM22P4-201ENST00000511318 336 ntBASIC7.51□□□□□ -1.21
MSH6P52701 AC034205.1-201ENST00000520621 638 ntBASIC7.51□□□□□ -1.21
MSH6P52701 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.51□□□□□ -1.21
MSH6P52701 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.51□□□□□ -1.21
MSH6P52701 NANOGP3-201ENST00000605855 286 ntBASIC7.51□□□□□ -1.21
MSH6P52701 AP003789.1-201ENST00000617737 605 ntBASIC7.51□□□□□ -1.21
MSH6P52701 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.51□□□□□ -1.21
MSH6P52701 AC005831.1-201ENST00000624384 1697 ntBASIC7.51□□□□□ -1.21
MSH6P52701 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
MSH6P52701 AC022164.1-201ENST00000568767 2673 ntBASIC7.51□□□□□ -1.21
MSH6P52701 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.51□□□□□ -1.21
MSH6P52701 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
MSH6P52701 AC010329.1-201ENST00000593903 8328 ntBASIC7.51□□□□□ -1.21
MSH6P52701 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
MSH6P52701 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.51□□□□□ -1.21
MSH6P52701 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
MSH6P52701 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
MSH6P52701 AL451142.1-201ENST00000375867 775 ntBASIC7.5□□□□□ -1.21
MSH6P52701 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.5□□□□□ -1.21
MSH6P52701 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.5□□□□□ -1.21
MSH6P52701 RPL23AP72-201ENST00000492447 435 ntBASIC7.5□□□□□ -1.21
MSH6P52701 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.5□□□□□ -1.21
MSH6P52701 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MSH6P52701 AL110118.1-201ENST00000553543 400 ntBASIC7.5□□□□□ -1.21
MSH6P52701 MIR4284-201ENST00000578924 81 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms