Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NEPNP-201ENST00000404786 1371 ntBASIC5.96□□□□□ -1.45
SSR1P43307 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SSR1P43307 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SSR1P43307 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.96□□□□□ -1.46
SSR1P43307 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.96□□□□□ -1.46
SSR1P43307 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.96□□□□□ -1.46
SSR1P43307 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSR1P43307 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.96□□□□□ -1.46
SSR1P43307 RNA5SP326-201ENST00000363209 110 ntBASIC5.96□□□□□ -1.46
SSR1P43307 OR10T1P-201ENST00000424327 947 ntBASIC5.96□□□□□ -1.46
SSR1P43307 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.96□□□□□ -1.46
SSR1P43307 RPS10P18-201ENST00000442662 495 ntBASIC5.96□□□□□ -1.46
SSR1P43307 TPT1P1-201ENST00000458495 518 ntBASIC5.96□□□□□ -1.46
SSR1P43307 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.96□□□□□ -1.46
SSR1P43307 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSR1P43307 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.96□□□□□ -1.46
SSR1P43307 AC025458.1-201ENST00000506046 166 ntBASIC5.96□□□□□ -1.46
SSR1P43307 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.96□□□□□ -1.46
SSR1P43307 AC074255.1-201ENST00000511259 501 ntBASIC5.96□□□□□ -1.46
SSR1P43307 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.96□□□□□ -1.46
SSR1P43307 HMGB1P19-201ENST00000517578 577 ntBASIC5.96□□□□□ -1.46
SSR1P43307 AC021678.3-201ENST00000517893 476 ntBASIC5.96□□□□□ -1.46
SSR1P43307 HMGN2P36-201ENST00000529541 409 ntBASIC5.96□□□□□ -1.46
SSR1P43307 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.96□□□□□ -1.46
SSR1P43307 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.96□□□□□ -1.46
SSR1P43307 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.96□□□□□ -1.46
SSR1P43307 DHFRP1-201ENST00000579682 559 ntBASIC5.96□□□□□ -1.46
SSR1P43307 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.96□□□□□ -1.46
SSR1P43307 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.96□□□□□ -1.46
SSR1P43307 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.96□□□□□ -1.46
SSR1P43307 AC009779.8-202ENST00000607990 932 ntBASIC5.96□□□□□ -1.46
SSR1P43307 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.96□□□□□ -1.46
SSR1P43307 AC025262.3-201ENST00000623666 360 ntBASIC5.96□□□□□ -1.46
SSR1P43307 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSR1P43307 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SSR1P43307 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SSR1P43307 PWAR1-201ENST00000624188 2414 ntBASIC5.96□□□□□ -1.46
SSR1P43307 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SSR1P43307 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SSR1P43307 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 RNA5SP500-201ENST00000364486 119 ntBASIC5.95□□□□□ -1.46
SSR1P43307 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
SSR1P43307 SUGT1P2-201ENST00000379452 992 ntBASIC5.95□□□□□ -1.46
SSR1P43307 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 AK4P4-201ENST00000419465 646 ntBASIC5.95□□□□□ -1.46
SSR1P43307 MARK2P12-201ENST00000420129 585 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.95□□□□□ -1.46
SSR1P43307 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.95□□□□□ -1.46
SSR1P43307 RN7SL570P-201ENST00000484405 292 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.95□□□□□ -1.46
SSR1P43307 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.95□□□□□ -1.46
SSR1P43307 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 AC068305.2-201ENST00000550567 1205 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 AC092121.1-201ENST00000569452 202 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.95□□□□□ -1.46
SSR1P43307 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.95□□□□□ -1.46
SSR1P43307 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AC129778.1-202ENST00000623812 261 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AC073593.1-201ENST00000624500 411 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AL591379.1-207ENST00000635982 261 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.95□□□□□ -1.46
SSR1P43307 AL596275.2-207ENST00000641188 675 ntBASIC5.95□□□□□ -1.46
SSR1P43307 OR8G3P-202ENST00000641572 1255 ntBASIC5.95□□□□□ -1.46
SSR1P43307 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SSR1P43307 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.95□□□□□ -1.46
SSR1P43307 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.95□□□□□ -1.46
SSR1P43307 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.95□□□□□ -1.46
SSR1P43307 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SSR1P43307 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSR1P43307 MTCO1P22-201ENST00000604619 1360 ntBASIC5.94□□□□□ -1.46
SSR1P43307 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
SSR1P43307 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSR1P43307 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSR1P43307 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSR1P43307 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSR1P43307 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.94□□□□□ -1.46
SSR1P43307 OR56A4-201ENST00000330728 1209 ntBASIC5.94□□□□□ -1.46
SSR1P43307 AL159987.1-201ENST00000347911 293 ntBASIC5.94□□□□□ -1.46
SSR1P43307 AL121886.1-201ENST00000358609 435 ntBASIC5.94□□□□□ -1.46
SSR1P43307 RNA5SP433-201ENST00000364491 114 ntBASIC5.94□□□□□ -1.46
SSR1P43307 AC005042.1-201ENST00000393397 800 ntBASIC5.94□□□□□ -1.46
SSR1P43307 OR51A6P-201ENST00000418680 1004 ntBASIC5.94□□□□□ -1.46
SSR1P43307 AC099670.2-201ENST00000435130 321 ntBASIC5.94□□□□□ -1.46
SSR1P43307 HMGB3P9-201ENST00000441799 583 ntBASIC5.94□□□□□ -1.46
SSR1P43307 CTSLP6-201ENST00000458273 1002 ntBASIC5.94□□□□□ -1.46
SSR1P43307 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms