Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HOXD13P35453 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 RNA5SP453-201ENST00000362503 119 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXD13P35453 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD13P35453 RIMKLBP2-201ENST00000424737 654 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC017019.1-201ENST00000426129 261 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC104843.2-201ENST00000427666 297 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 TRIM60P13-201ENST00000432350 1283 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD13P35453 AL450996.1-201ENST00000445574 1202 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD13P35453 AC091912.1-201ENST00000511351 248 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD13P35453 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD13P35453 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD13P35453 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXD13P35453 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD13P35453 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXD13P35453 AC008521.2-201ENST00000591021 259 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD13P35453 HMGB1P51-201ENST00000605166 638 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 PPATP2-201ENST00000605635 508 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AL118556.2-201ENST00000614375 824 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC008115.3-201ENST00000614874 549 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC127024.6-201ENST00000621598 424 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AC103703.1-201ENST00000634783 663 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD13P35453 MT-RNR2-201ENST00000387347 1559 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 AL359715.3-201ENST00000569267 2123 ntBASIC6.08□□□□□ -1.44
HOXD13P35453 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD13P35453 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD13P35453 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
HOXD13P35453 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXD13P35453 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD13P35453 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HOXD13P35453 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXD13P35453 OR5T3-201ENST00000303059 1023 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 SNORD65-201ENST00000391079 73 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 U3.23-201ENST00000391132 200 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 GAPDHP42-201ENST00000406848 981 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL358178.1-201ENST00000407698 397 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL354868.1-201ENST00000417077 482 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 FAM204CP-201ENST00000424489 642 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXD13P35453 AL445528.1-201ENST00000426330 420 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 RPL7P56-201ENST00000429441 717 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AC002069.1-201ENST00000429649 1159 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXD13P35453 AL606490.8-201ENST00000441624 319 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL161636.2-201ENST00000445179 927 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXD13P35453 MORF4L1P4-201ENST00000450245 976 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD13P35453 LDHBP2-201ENST00000456969 1005 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HOXD13P35453 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 PPIAP19-201ENST00000486414 492 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 GLUD1P3-202ENST00000508551 200 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AC090568.1-201ENST00000509499 856 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXD13P35453 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXD13P35453 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXD13P35453 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD13P35453 MIR1273E-201ENST00000581165 102 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 MIR4505-201ENST00000582238 73 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD13P35453 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXD13P35453 AP000769.2-201ENST00000602344 396 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL356608.1-201ENST00000610034 820 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL118522.2-201ENST00000616045 615 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 AL118508.4-201ENST00000624142 1176 ntBASIC6.07□□□□□ -1.44
HOXD13P35453 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXD13P35453 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HOXD13P35453 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXD13P35453 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXD13P35453 AC144833.1-201ENST00000567953 4089 ntBASIC6.06□□□□□ -1.44
HOXD13P35453 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXD13P35453 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXD13P35453 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXD13P35453 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXD13P35453 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXD13P35453 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXD13P35453 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.06□□□□□ -1.44
HOXD13P35453 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.06□□□□□ -1.44
HOXD13P35453 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
HOXD13P35453 TMSB4XP4-201ENST00000323496 618 ntBASIC6.06□□□□□ -1.44
HOXD13P35453 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms