Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 AC092725.2-201ENST00000567658 1389 ntBASIC7.81□□□□□ -1.16
RFX1P22670 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 DBF4P1-201ENST00000412976 1892 ntBASIC7.81□□□□□ -1.16
RFX1P22670 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.8□□□□□ -1.16
RFX1P22670 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.8□□□□□ -1.16
RFX1P22670 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
RFX1P22670 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
RFX1P22670 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.8□□□□□ -1.16
RFX1P22670 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 CTAGE11P-201ENST00000451540 2353 ntBASIC7.8□□□□□ -1.16
RFX1P22670 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 RNU5D-1-201ENST00000363299 116 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC104297.1-201ENST00000393779 870 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AL133264.1-201ENST00000407157 562 ntBASIC7.8□□□□□ -1.16
RFX1P22670 RNU2-42P-201ENST00000410697 113 ntBASIC7.8□□□□□ -1.16
RFX1P22670 RN7SKP33-201ENST00000410942 340 ntBASIC7.8□□□□□ -1.16
RFX1P22670 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 RPL21P108-201ENST00000413857 481 ntBASIC7.8□□□□□ -1.16
RFX1P22670 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.8□□□□□ -1.16
RFX1P22670 AC007559.1-201ENST00000428736 355 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.8□□□□□ -1.16
RFX1P22670 MYO5BP3-201ENST00000431872 1279 ntBASIC7.8□□□□□ -1.16
RFX1P22670 LINC00328-2P-201ENST00000436585 219 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC104306.1-201ENST00000449702 371 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.8□□□□□ -1.16
RFX1P22670 TPT1P7-201ENST00000458300 517 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.8□□□□□ -1.16
RFX1P22670 AC126182.1-201ENST00000478134 357 ntBASIC7.8□□□□□ -1.16
RFX1P22670 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.8□□□□□ -1.16
RFX1P22670 RN7SL797P-201ENST00000486314 297 ntBASIC7.8□□□□□ -1.16
RFX1P22670 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.8□□□□□ -1.16
RFX1P22670 RPL10P7-201ENST00000495649 625 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC096751.1-202ENST00000502691 1067 ntBASIC7.8□□□□□ -1.16
RFX1P22670 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 OR7E163P-201ENST00000505943 894 ntBASIC7.8□□□□□ -1.16
RFX1P22670 GTF2F2P1-201ENST00000511083 675 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.8□□□□□ -1.16
RFX1P22670 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.8□□□□□ -1.16
RFX1P22670 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.8□□□□□ -1.16
RFX1P22670 AP001000.1-201ENST00000526843 742 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC135983.3-201ENST00000528049 1226 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.8□□□□□ -1.16
RFX1P22670 AC087883.1-201ENST00000551882 391 ntBASIC7.8□□□□□ -1.16
RFX1P22670 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 AC091932.1-201ENST00000569381 427 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.8□□□□□ -1.16
RFX1P22670 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.8□□□□□ -1.16
RFX1P22670 AC091805.2-201ENST00000603848 235 ntBASIC7.8□□□□□ -1.16
RFX1P22670 AC019257.2-201ENST00000605539 497 ntBASIC7.8□□□□□ -1.16
RFX1P22670 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 OR8G7P-201ENST00000616658 848 ntBASIC7.8□□□□□ -1.16
RFX1P22670 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.8□□□□□ -1.16
RFX1P22670 AL136298.2-201ENST00000556497 1570 ntBASIC7.8□□□□□ -1.16
RFX1P22670 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RFX1P22670 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RFX1P22670 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.79□□□□□ -1.16
RFX1P22670 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RFX1P22670 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms