Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC037198.3-201ENST00000616754 526 ntBASIC4.79□□□□□ -1.64
USF1P22415 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USF1P22415 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.79□□□□□ -1.64
USF1P22415 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.79□□□□□ -1.64
USF1P22415 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.79□□□□□ -1.64
USF1P22415 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USF1P22415 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USF1P22415 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.79□□□□□ -1.64
USF1P22415 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USF1P22415 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USF1P22415 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USF1P22415 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
USF1P22415 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USF1P22415 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
USF1P22415 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.79□□□□□ -1.64
USF1P22415 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
USF1P22415 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.78□□□□□ -1.64
USF1P22415 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.78□□□□□ -1.64
USF1P22415 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
USF1P22415 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
USF1P22415 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.78□□□□□ -1.64
USF1P22415 AC235565.1-201ENST00000456962 1325 ntBASIC4.78□□□□□ -1.64
USF1P22415 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
USF1P22415 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.78□□□□□ -1.64
USF1P22415 AP005432.1-201ENST00000580891 3485 ntBASIC4.78□□□□□ -1.64
USF1P22415 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 AL159987.1-201ENST00000347911 293 ntBASIC4.78□□□□□ -1.64
USF1P22415 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 RNU4-2-201ENST00000365668 141 ntBASIC4.78□□□□□ -1.64
USF1P22415 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 MIR937-201ENST00000401271 86 ntBASIC4.78□□□□□ -1.64
USF1P22415 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.78□□□□□ -1.64
USF1P22415 SNORA81-201ENST00000408493 178 ntBASIC4.78□□□□□ -1.64
USF1P22415 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.78□□□□□ -1.64
USF1P22415 AL133173.1-201ENST00000423458 397 ntBASIC4.78□□□□□ -1.64
USF1P22415 BX119904.3-201ENST00000428194 957 ntBASIC4.78□□□□□ -1.64
USF1P22415 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
USF1P22415 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.78□□□□□ -1.64
USF1P22415 SBDSP1-204ENST00000453858 737 ntBASIC4.78□□□□□ -1.64
USF1P22415 AC011225.1-201ENST00000457751 369 ntBASIC4.78□□□□□ -1.64
USF1P22415 EIF1P7-201ENST00000487533 337 ntBASIC4.78□□□□□ -1.64
USF1P22415 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.78□□□□□ -1.64
USF1P22415 AC105420.1-201ENST00000504389 582 ntBASIC4.78□□□□□ -1.64
USF1P22415 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 MIR2117-201ENST00000516780 80 ntBASIC4.78□□□□□ -1.64
USF1P22415 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.78□□□□□ -1.64
USF1P22415 AL121594.2-201ENST00000541658 472 ntBASIC4.78□□□□□ -1.64
USF1P22415 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.78□□□□□ -1.64
USF1P22415 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.78□□□□□ -1.64
USF1P22415 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.78□□□□□ -1.64
USF1P22415 AC025857.2-201ENST00000602711 238 ntBASIC4.78□□□□□ -1.64
USF1P22415 AL161912.3-201ENST00000605404 628 ntBASIC4.78□□□□□ -1.64
USF1P22415 RNU6-84P-201ENST00000607737 102 ntBASIC4.78□□□□□ -1.64
USF1P22415 RNA5SP439-201ENST00000617595 124 ntBASIC4.78□□□□□ -1.64
USF1P22415 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 SAMMSON-209ENST00000641222 1100 ntBASIC4.78□□□□□ -1.64
USF1P22415 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 AC007842.1-201ENST00000597336 2039 ntBASIC4.78□□□□□ -1.64
USF1P22415 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
USF1P22415 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
USF1P22415 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.78□□□□□ -1.64
USF1P22415 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USF1P22415 TCP11X1-202ENST00000622971 1372 ntBASIC4.78□□□□□ -1.64
USF1P22415 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 MRRFP1-201ENST00000435941 1675 ntBASIC4.77□□□□□ -1.65
USF1P22415 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USF1P22415 SNORA58B-201ENST00000364259 136 ntBASIC4.77□□□□□ -1.65
USF1P22415 RNA5SP131-201ENST00000365452 119 ntBASIC4.77□□□□□ -1.65
USF1P22415 RNU6-171P-201ENST00000384354 107 ntBASIC4.77□□□□□ -1.65
USF1P22415 MIR223-201ENST00000385204 110 ntBASIC4.77□□□□□ -1.65
USF1P22415 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.77□□□□□ -1.65
USF1P22415 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.77□□□□□ -1.65
USF1P22415 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.77□□□□□ -1.65
USF1P22415 AC007394.1-201ENST00000421941 531 ntBASIC4.77□□□□□ -1.65
USF1P22415 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms