Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6□□□□□ -1.45
COL11A1P12107 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 AC009027.1-201ENST00000604510 479 ntBASIC6□□□□□ -1.45
COL11A1P12107 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 AC112694.2-201ENST00000623697 768 ntBASIC6□□□□□ -1.45
COL11A1P12107 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 AC012213.2-201ENST00000562917 4597 ntBASIC6□□□□□ -1.45
COL11A1P12107 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL11A1P12107 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COL11A1P12107 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6□□□□□ -1.45
COL11A1P12107 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 RNA5SP505-201ENST00000364748 108 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 MIR141-201ENST00000384975 95 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 RAB28P1-201ENST00000411517 641 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 AC006427.1-201ENST00000514359 712 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AC092490.3-201ENST00000545370 572 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AC018558.5-201ENST00000565840 952 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 AC104785.1-201ENST00000603220 588 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AC087283.1-201ENST00000604029 1074 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 THAP12P4-201ENST00000528321 2266 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL11A1P12107 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 U3.10-201ENST00000364459 214 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 RNA5SP428-201ENST00000365129 132 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL11A1P12107 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 FAR2P2-201ENST00000413041 594 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AL807761.1-201ENST00000417622 171 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 FAR2P4-202ENST00000425399 584 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 RPL7P11-201ENST00000437586 658 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 NOP56P2-201ENST00000447491 769 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.99□□□□□ -1.45
COL11A1P12107 RPL7P41-201ENST00000485823 957 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 COX6B1P5-201ENST00000509843 249 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 AP001804.1-201ENST00000526868 919 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 GSTP1P1-201ENST00000548078 319 ntBASIC5.99□□□□□ -1.45
COL11A1P12107 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.99□□□□□ -1.45
COL11A1P12107 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.99□□□□□ -1.45
COL11A1P12107 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL11A1P12107 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.99□□□□□ -1.45
COL11A1P12107 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 AC131971.1-201ENST00000332881 1482 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.98□□□□□ -1.45
COL11A1P12107 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL11A1P12107 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
COL11A1P12107 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL11A1P12107 MTHFD2P5-201ENST00000320415 844 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 AC013442.1-201ENST00000397347 228 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 MGAT2P2-201ENST00000427194 797 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.98□□□□□ -1.45
COL11A1P12107 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.98□□□□□ -1.45
COL11A1P12107 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.98□□□□□ -1.45
COL11A1P12107 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.98□□□□□ -1.45
COL11A1P12107 BTF3P13-201ENST00000513224 490 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.98□□□□□ -1.45
COL11A1P12107 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.98□□□□□ -1.45
COL11A1P12107 AC099494.2-201ENST00000623371 978 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 AC015799.1-201ENST00000622996 3122 ntBASIC5.98□□□□□ -1.45
COL11A1P12107 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
COL11A1P12107 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.98□□□□□ -1.45
COL11A1P12107 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
COL11A1P12107 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
COL11A1P12107 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms