Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MRPS33P2-201ENST00000507850 322 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.13□□□□□ -0.95
TOP2AP11388 AC091042.1-201ENST00000579213 173 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 AL356608.1-201ENST00000610034 820 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC9.13□□□□□ -0.95
TOP2AP11388 AC135068.12-201ENST00000637370 931 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 AC073869.10-201ENST00000642016 354 ntBASIC9.13□□□□□ -0.95
TOP2AP11388 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
TOP2AP11388 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
TOP2AP11388 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC9.13□□□□□ -0.95
TOP2AP11388 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TOP2AP11388 EEF1A1P36-201ENST00000427807 1351 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 AC016251.2-201ENST00000623393 3089 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
TOP2AP11388 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 SNORA11-201ENST00000408789 128 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 AC092570.3-201ENST00000420113 693 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 AC004074.1-201ENST00000421810 1063 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC9.12□□□□□ -0.95
TOP2AP11388 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.12□□□□□ -0.95
TOP2AP11388 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.12□□□□□ -0.95
TOP2AP11388 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC9.12□□□□□ -0.95
TOP2AP11388 RN7SL205P-201ENST00000490174 284 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 GAPDHP56-201ENST00000506031 988 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.12□□□□□ -0.95
TOP2AP11388 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.12□□□□□ -0.95
TOP2AP11388 SEPT10P1-201ENST00000517342 1162 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC9.12□□□□□ -0.95
TOP2AP11388 RN7SL52P-201ENST00000584271 284 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 RN7SL722P-201ENST00000617780 284 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 RN7SL565P-201ENST00000618246 284 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 AC099654.6-201ENST00000636487 512 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC9.12□□□□□ -0.95
TOP2AP11388 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
TOP2AP11388 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
TOP2AP11388 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TOP2AP11388 AC006210.2-201ENST00000367074 1545 ntBASIC9.12□□□□□ -0.95
TOP2AP11388 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
TOP2AP11388 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC9.11□□□□□ -0.95
TOP2AP11388 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC9.11□□□□□ -0.95
TOP2AP11388 RPS29P10-201ENST00000439197 166 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 AC073072.2-201ENST00000447425 348 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC9.11□□□□□ -0.95
TOP2AP11388 AC093827.1-201ENST00000480094 861 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC9.11□□□□□ -0.95
TOP2AP11388 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC9.11□□□□□ -0.95
TOP2AP11388 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 AC005377.1-201ENST00000605126 456 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 AL139124.1-201ENST00000609123 421 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 AC010435.1-201ENST00000623353 1177 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
TOP2AP11388 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
TOP2AP11388 BX284613.1-201ENST00000452221 1641 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 AC015799.1-201ENST00000622996 3122 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
TOP2AP11388 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.11□□□□□ -0.95
TOP2AP11388 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC9.11□□□□□ -0.95
TOP2AP11388 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC9.11□□□□□ -0.95
TOP2AP11388 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
TOP2AP11388 AC003973.3-201ENST00000624863 2822 ntBASIC9.11□□□□□ -0.95
TOP2AP11388 MTHFD2P5-201ENST00000320415 844 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 SNORA66-201ENST00000384792 133 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 HMGB3P7-201ENST00000400214 611 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
TOP2AP11388 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC9.1□□□□□ -0.95
TOP2AP11388 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 RPL7P41-201ENST00000485823 957 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC9.1□□□□□ -0.95
TOP2AP11388 AP001804.1-201ENST00000526868 919 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC9.1□□□□□ -0.95
TOP2AP11388 LINC02035-201ENST00000610128 5476 ntBASIC9.1□□□□□ -0.95
TOP2AP11388 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
TOP2AP11388 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
TOP2AP11388 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms