Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 XKRY-202ENST00000624960 1581 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC6P09630 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
HOXC6P09630 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HOXC6P09630 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 OR55B1P-203ENST00000641518 2602 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXC6P09630 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXC6P09630 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC6P09630 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXC6P09630 MT-RNR2-201ENST00000387347 1559 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC6P09630 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC6P09630 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 SNORA16A-201ENST00000384342 137 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HOXC6P09630 RNA5SP91-201ENST00000390902 119 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 SNORA40.4-201ENST00000390971 128 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 AL133388.1-201ENST00000404509 287 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 AC009784.1-201ENST00000426484 460 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 SDR42E1P3-201ENST00000438345 502 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC6P09630 AC015864.1-201ENST00000496512 544 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 PMS2P3-207ENST00000529061 717 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 NMNAT1P5-201ENST00000559657 841 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXC6P09630 DHFRP1-201ENST00000579682 559 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 AC011840.5-201ENST00000582125 771 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXC6P09630 AC010809.3-201ENST00000621310 641 ntBASIC6.24□□□□□ -1.41
HOXC6P09630 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC6P09630 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXC6P09630 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXC6P09630 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXC6P09630 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXC6P09630 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC6P09630 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 SNORA17.1-201ENST00000362945 126 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 SNORA56-201ENST00000383966 129 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HOXC6P09630 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC092651.1-201ENST00000426110 312 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.23□□□□□ -1.41
HOXC6P09630 MTND2P39-201ENST00000457230 764 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 MTND3P6-201ENST00000485242 339 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 PDCL3P4-201ENST00000489621 720 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC110775.1-201ENST00000513721 462 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AC013701.1-201ENST00000522657 465 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 HIGD1AP5-201ENST00000529959 259 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXC6P09630 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 RPL10P14-201ENST00000565265 298 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AC106730.2-201ENST00000566641 540 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.23□□□□□ -1.41
HOXC6P09630 AC011447.4-201ENST00000587562 111 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.23□□□□□ -1.41
HOXC6P09630 AL513327.3-201ENST00000602618 469 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 AL133481.2-203ENST00000607558 139 ntBASIC6.23□□□□□ -1.41
HOXC6P09630 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HOXC6P09630 AL445528.2-201ENST00000620582 470 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms