Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL390334.1-201ENST00000556395 450 ntBASIC5.98□□□□□ -1.45
TPM1P09493 PRPF19P1-201ENST00000584766 898 ntBASIC5.98□□□□□ -1.45
TPM1P09493 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM1P09493 AC091167.5-201ENST00000605689 894 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AP001052.1-201ENST00000626421 99 ntBASIC5.98□□□□□ -1.45
TPM1P09493 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM1P09493 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.98□□□□□ -1.45
TPM1P09493 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.98□□□□□ -1.45
TPM1P09493 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TPM1P09493 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
TPM1P09493 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM1P09493 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 AC079298.1-201ENST00000625026 1619 ntBASIC5.97□□□□□ -1.45
TPM1P09493 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM1P09493 MIR551A-201ENST00000385042 96 ntBASIC5.97□□□□□ -1.45
TPM1P09493 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM1P09493 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM1P09493 AC090804.1-201ENST00000448870 490 ntBASIC5.97□□□□□ -1.45
TPM1P09493 TPT1P1-201ENST00000458495 518 ntBASIC5.97□□□□□ -1.45
TPM1P09493 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM1P09493 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM1P09493 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM1P09493 SCARNA20.4-201ENST00000516969 131 ntBASIC5.97□□□□□ -1.45
TPM1P09493 RNA5SP340-201ENST00000517132 107 ntBASIC5.97□□□□□ -1.45
TPM1P09493 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM1P09493 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM1P09493 AC007342.5-201ENST00000571340 2142 ntBASIC5.97□□□□□ -1.45
TPM1P09493 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM1P09493 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM1P09493 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM1P09493 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
TPM1P09493 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
TPM1P09493 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TPM1P09493 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
TPM1P09493 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM1P09493 AC104966.1-201ENST00000467010 1464 ntBASIC5.96□□□□□ -1.45
TPM1P09493 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
TPM1P09493 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TPM1P09493 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 AC011503.2-201ENST00000594230 1500 ntBASIC5.96□□□□□ -1.46
TPM1P09493 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 RMRPP5-201ENST00000411156 267 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM1P09493 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.96□□□□□ -1.46
TPM1P09493 CYCSP24-201ENST00000445119 316 ntBASIC5.96□□□□□ -1.46
TPM1P09493 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.96□□□□□ -1.46
TPM1P09493 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM1P09493 SEPT7P3-201ENST00000455017 621 ntBASIC5.96□□□□□ -1.46
TPM1P09493 RPS12P31-201ENST00000491419 398 ntBASIC5.96□□□□□ -1.46
TPM1P09493 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 RBBP4P1-201ENST00000502424 1276 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM1P09493 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM1P09493 LDHAP1-201ENST00000509421 992 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.96□□□□□ -1.46
TPM1P09493 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM1P09493 AC116917.1-201ENST00000520558 305 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AP006245.2-201ENST00000522004 300 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM1P09493 AP003033.2-201ENST00000528901 805 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.96□□□□□ -1.46
TPM1P09493 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.96□□□□□ -1.46
TPM1P09493 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.96□□□□□ -1.46
TPM1P09493 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.96□□□□□ -1.46
TPM1P09493 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.96□□□□□ -1.46
TPM1P09493 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.96□□□□□ -1.46
TPM1P09493 AC025574.2-201ENST00000615621 514 ntBASIC5.96□□□□□ -1.46
TPM1P09493 CASC19-274ENST00000642018 970 ntBASIC5.96□□□□□ -1.46
TPM1P09493 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 AL731532.2-201ENST00000623542 1953 ntBASIC5.96□□□□□ -1.46
TPM1P09493 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM1P09493 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AC114947.2-201ENST00000565748 2125 ntBASIC5.96□□□□□ -1.46
TPM1P09493 AP001642.1-201ENST00000624727 2117 ntBASIC5.96□□□□□ -1.46
TPM1P09493 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TPM1P09493 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms